RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MTIF3Q9H2K0 278 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM245Q9H330 911 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ABHD16BQ9H3Z7 469 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 BCAS3Q9H6U6 928 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 UNKLQ9H9P5 680 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 MLXIPQ9HAP2 919 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CYP3A43Q9HB55 503 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 IL21RQ9HBE5 538 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SYTL2Q9HCH5 934 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TBC1D23Q9NUY8 699 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ZSCAN32Q9NX65 697 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PEF1Q9UBV8 284 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 B4GALT6Q9UBX8 382 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 APOBEC3BQ9UH17 382 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CNOT7Q9UIV1 285 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TUBE1Q9UJT0 475 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CA14Q9ULX7 337 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SPATA2Q9UM82 520 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RUVBL2Q9Y230 463 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SF3B6Q9Y3B4 125 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 LRRC42Q9Y546 428 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PCDHA10Q9Y5I2 948 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NOX1Q9Y5S8 564 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PUS1Q9Y606 427 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 AP4B1Q9Y6B7 739 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TEX264Q9Y6I9 313 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SCAPERQ9BY12 1400 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CNTLNQ9NXG0 1405 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LMTK3Q96Q04 1460 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 A0A0J9YYE9 177 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FAM234BA2RU67 622 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 VWA3AA6NCI4 1184 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 KBTBD13C9JR72 458 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PRSS44E7EML9 344 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 F8WDY8 70 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ARVCFO00192 962 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SLC9A3R1O14745 358 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PPM1DO15297 605 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PI15O43692 258 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 BUB1BO60566 1050 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GPC4O75487 556 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RPS6KA4O75676 772 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CABYRO75952 493 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SUN1O94901 812 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RPP14O95059 124 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CRYZL1O95825 349 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 DDAH2O95865 285 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LDLRP01130 860 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TRBC1P01850 177 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PCCBP05166 539 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CAPN1P07384 714 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 YES1P07947 543 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 UBTFL1P0CB47 393 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF888P0CJ79 500 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 F3P13726 295 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF20P17024 532 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PFKLP17858 780 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ITGB6P18564 788 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FGFR2P21802 821 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SP100P23497 879 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CDC25AP30304 524 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 IFNA8P32881 189 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 HMGCLP35914 325 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 MC3RP41968 323 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GRIA2P42262 883 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 MAGEA11P43364 429 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PTPN9P43378 593 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GPR4P46093 362 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SLC1A6P48664 564 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LMAN1P49257 510 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FHITP49789 147 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PNLIPRP1P54315 467 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NLRP11P59045 1033 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RPS3AP61247 264 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PRR5P85299 388 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 POU4F1Q01851 419 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 KIF23Q02241 960 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TAP1Q03518 808 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 DLX2Q07687 328 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SF3A3Q12874 501 aaKnown RBP eCLIP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 IL18Q14116 193 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CLCA4Q14CN2 919 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FASTKD3Q14CZ7 662 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM132BQ14DG7 1078 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LARS2Q15031 903 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PRICKLE4Q2TBC4 344 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 UAP1L1Q3KQV9 507 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 HSDL1Q3SXM5 330 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GLE1Q53GS7 698 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF311Q5JNZ3 666 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CCNJQ5T5M9 372 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ARMC12Q5T9G4 340 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 STRIP1Q5VSL9 837 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 BROXQ5VW32 411 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZDHHC20Q5W0Z9 365 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 DUPD1Q68J44 220 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms