RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ARSFP54793 590 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ADARP55265 1226 aaKnown RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CDH13P55290 713 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 SNU13P55769 128 aaKnown RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CXCL9Q07325 125 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 MZT1Q08AG7 82 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 LRRC74AQ0VAA2 488 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 RPS6KA1Q15418 735 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ARL13AQ5H913 290 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 C10orf76Q5T2E6 689 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 LRIF1Q5T3J3 769 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 MRPL43Q8N983 215 aaKnown RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 SLC4A11Q8NBS3 891 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CNNM3Q8NE01 707 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 CEP76Q8TAP6 659 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF398Q8TD17 642 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 TEKT1Q969V4 418 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 EGFL8Q99944 293 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 SH3GL2Q99962 352 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 EFHD1Q9BUP0 239 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 TM2D2Q9BX73 214 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 C1QTNF5Q9BXJ0 243 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 DNAJC18Q9H819 358 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 Q9N2J8 555 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 IPO11Q9UI26 975 aaKnown RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 FBXW11Q9UKB1 542 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 SLC8A2Q9UPR5 921 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 EXOC7Q9UPT5 735 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ICKQ9UPZ9 632 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF148Q9UQR1 794 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 MAU2Q9Y6X3 613 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 ARHGEF17Q96PE2 2063 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-204ENST00000412061 UTYO14607 1347 aa4.53□□□□□ -1.68
BRCA1-204ENST00000412061 MAGEB17A8MXT2 336 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ZBTB43O43298 467 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 PEX11AO75192 247 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 C1QL1O75973 258 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 DDHD2O94830 711 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 TRIM16O95361 564 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 APBB3O95704 486 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 MT-CYBP00156 380 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 PLAUP00749 431 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 IGLV2-14P01704 120 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ACTN1P12814 892 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 KCNA5P22460 613 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 CTNNB1P35222 781 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 SOAT1P35610 550 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 CAMLGP49069 296 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 PTH2RP49190 550 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 KHKP50053 298 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ARFIP1P53367 373 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 CLDN2P57739 230 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 RHAGQ02094 409 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 RBPJQ06330 500 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 TRA2AQ13595 282 aaKnown RBP eCLIP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 INAQ16352 499 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ME3Q16798 604 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM119Q4V9L6 283 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 KCNT1Q5JUK3 1230 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 DNTTIP2Q5QJE6 756 aaKnown RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 C6orf136Q5SQH8 315 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 STRIP1Q5VSL9 837 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 FAM91A1Q658Y4 838 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM211Q6ICI0 200 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 HEPHL1Q6MZM0 1159 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ZCCHC12Q6PEW1 402 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 MOXD1Q6UVY6 613 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF813Q6ZN06 617 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 C15orf39Q6ZRI6 1047 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 MIER3Q7Z3K6 550 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 RNF168Q8IYW5 571 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 OSR1Q8TAX0 266 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 SLC13A3Q8WWT9 602 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 MOAP1Q96BY2 351 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 GDAP1L1Q96MZ0 367 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 SEPT5Q99719 369 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 HNRNPABQ99729 332 aaKnown RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 SCNM1Q9BWG6 230 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 TKTL2Q9H0I9 626 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 VPS33BQ9H267 617 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 PIH1D3Q9NQM4 214 aaKnown RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 CWC15Q9P013 229 aaKnown RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF624Q9P2J8 865 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 HEY2Q9UBP5 337 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 ZNHIT2Q9UHR6 403 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 STX8Q9UNK0 236 aa4.52□□□□□ -1.69
BRCA1-204ENST00000412061 LSM4Q9Y4Z0 139 aaKnown RBP4.52□□□□□ -1.69
BRCA1-204ENST00000412061 A0A0B4J293 547 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 C1orf226A1L170 272 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 WIPF3A6NGB9 483 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 CGB1A6NKQ9 187 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 FAM86B1E9PN63 330 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 EIF3DO15371 548 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 OGG1O15527 345 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms