RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 KIF26BQ2KJY2 2108 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 DCAF12Q5T6F0 453 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 VSTM4Q8IW00 320 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 SLC37A2Q8TED4 501 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 AGAP3Q96P47 875 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
MCF2L-210ENST00000409954 TRIB3Q96RU7 358 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 ZSCAN5AQ9BUG6 496 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 SPATA16Q9BXB7 569 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 SLC39A1Q9NY26 324 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 TBC1D29Q9UFV1 150 aa14.37□□□□□ -0.11
MCF2L-210ENST00000409954 OAS3Q9Y6K5 1087 aaKnown RBP14.37□□□□□ -0.11
MCF2L-210ENST00000409954 SMG1Q96Q15 3661 aaKnown RBP14.37□□□□□ -0.11
MCF2L-210ENST00000409954 AHCTF1Q8WYP5 2266 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 FADS2P1A8MWK0 482 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 J3QKU1 62 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 MTSS1O43312 755 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 F3P13726 295 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-210ENST00000409954 EPHA4P54764 986 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 DCDC1P59894 354 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 TFDP2Q14188 446 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 KDELC2Q7Z4H8 507 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ARHGAP22Q7Z5H3 698 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 RFX6Q8HWS3 928 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 CNGA4Q8IV77 575 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 TRAM1L1Q8N609 369 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 NCSTNQ92542 709 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ART4Q93070 314 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 NKD1Q969G9 470 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-210ENST00000409954 TADA1Q96BN2 335 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 OLFM3Q96PB7 478 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ZPBPQ9BS86 351 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 GPR63Q9BZJ6 419 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 SEMA4CQ9C0C4 833 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ATXN10Q9UBB4 475 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 NFKBIL1Q9UBC1 381 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-210ENST00000409954 PRKAB1Q9Y478 270 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ANKRD36A6QL64 1941 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 LRP4O75096 1905 aa14.36□□□□□ -0.11
MCF2L-210ENST00000409954 ARHGEF17Q96PE2 2063 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-210ENST00000409954 CAPN5O15484 640 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-210ENST00000409954 VEGFDO43915 354 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 NDST3O95803 873 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 EPOP01588 193 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 XRCC1P18887 633 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-210ENST00000409954 MC2RQ01718 297 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 LINC00303Q3SY05 128 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 ZNF569Q5MCW4 686 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 PLXDC1Q8IUK5 500 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 PHYKPLQ8IUZ5 450 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 GPR26Q8NDV2 337 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 EID2BQ96D98 161 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 TEKT5Q96M29 485 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 UCK1Q9HA47 277 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 GLOD4Q9HC38 313 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 FBXO8Q9NRD0 319 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.35□□□□□ -0.11
MCF2L-210ENST00000409954 CPNE7Q9UBL6 633 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 SHOC2Q9UQ13 582 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 KCNK6Q9Y257 313 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 B3GALT1Q9Y5Z6 326 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 LOC400499M0QZD8 3231 aa14.35□□□□□ -0.11
MCF2L-210ENST00000409954 A0A0A6YYK5 440 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 A6NCN8 305 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 EFCAB7A8K855 629 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 AKR1B15C9JRZ8 316 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 CHUKO15111 745 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 KMOO15229 486 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 SNX2O60749 519 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 KCNJ13O60928 360 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 MFAP3LO75121 409 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 EML2O95834 649 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 KRT1P04264 644 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 ACP5P13686 325 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 ZNF8P17098 575 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 MPSTP25325 297 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 UGT1A3P35503 534 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 TNNT3P45378 269 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 NFATC2Q13469 925 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 GALNT3Q14435 633 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 ZDHHC20Q5W0Z9 365 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 NPNTQ6UXI9 565 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 IL22RA1Q8N6P7 574 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 EXD3Q8N9H8 876 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 DTX3LQ8TDB6 740 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 BRSK1Q8TDC3 778 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 GLYATL1Q969I3 302 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 VAT1Q99536 393 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 ZMYND15Q9H091 742 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 OR2AG1Q9H205 316 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 TRABDQ9H4I3 376 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 KLC4Q9NSK0 619 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 OCIAD1Q9NX40 245 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms