RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ZNF8P17098 575 aaPredicted RBP11.78□□□□□ -0.52
LINC00544-201ENST00000400540 TCN2P20062 427 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 MAN1A1P33908 653 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 GJC1P36383 396 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 SPINT3P49223 89 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 ZNF165P49910 485 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 EPHA4P54764 986 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 UBE2IP63279 158 aaKnown RBP11.78□□□□□ -0.52
LINC00544-201ENST00000400540 SH3BP2P78314 561 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 FOXM1Q08050 763 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 ATP13A4Q4VNC1 1196 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 LYSMD3Q7Z3D4 306 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 TMEM135Q86UB9 458 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 EID2BQ96D98 161 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 HERPUD2Q9BSE4 406 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 EFHD1Q9BUP0 239 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 PCDH9Q9HC56 1237 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 RBM22Q9NW64 420 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00544-201ENST00000400540 DTLQ9NZJ0 730 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 ATXN10Q9UBB4 475 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 MAN2B2Q9Y2E5 1009 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 RPS6KL1Q9Y6S9 549 aa11.78□□□□□ -0.52
LINC00544-201ENST00000400540 MATN3O15232 486 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 MTSS1O43312 755 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 GRID2O43424 1007 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 NUAK1O60285 661 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 MMP2P08253 660 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 GP1BBP13224 206 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 TYRP1P17643 537 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 DLSTP36957 453 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SEPHS1P49903 392 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 ARSEP51690 589 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 DPYSL3Q14195 570 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 GALNT3Q14435 633 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
LINC00544-201ENST00000400540 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SEPT7Q16181 437 aaKnown RBP11.77□□□□□ -0.53
LINC00544-201ENST00000400540 QPCTQ16769 361 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 CRTC3Q6UUV7 619 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 NIPA2Q8N8Q9 360 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 GALNT6Q8NCL4 622 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 FAM71BQ8TC56 605 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 MIB2Q96AX9 1013 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SH3KBP1Q96B97 665 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 ELMO2Q96JJ3 720 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 C9orf72Q96LT7 481 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 TGM7Q96PF1 710 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 LYSMD1Q96S90 227 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 ULBP3Q9BZM4 244 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 BRD8Q9H0E9 1235 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 OR2AG1Q9H205 316 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 OSGEPL1Q9H4B0 414 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 FAM83DQ9H4H8 585 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SLC23A2Q9UGH3 650 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 CROTQ9UKG9 612 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 KCNMB2Q9Y691 235 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SLC30A1Q9Y6M5 507 aa11.77□□□□□ -0.53
LINC00544-201ENST00000400540 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
LINC00544-201ENST00000400540 KIR2DS5A0A0G2JLQ3 304 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 A0A0G2JNG1 304 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 LILRA5A6NI73 299 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 KIR2DS3K7RE56 304 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 KIAA0754O94854 1291 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 SLC4A1P02730 911 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 C9P02748 559 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 ANKRD34CP0C6C1 535 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 SLC2A4P14672 509 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 CD86P42081 329 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 SSR1P43307 286 aaKnown RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 MLLT10P55197 1068 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 MC1RQ01726 317 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 GBE1Q04446 702 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 TYRO3Q06418 890 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 KLRB1Q12918 225 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 MAP7Q14244 749 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 ERV3-1Q14264 604 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 KIR2DS5Q14953 304 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 ANO6Q4KMQ2 910 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 HGSNATQ68CP4 663 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 PLXDC1Q8IUK5 500 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 PHYKPLQ8IUZ5 450 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 FAM26EQ8N5C1 309 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 ESX1Q8N693 406 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 OR6C1Q96RD1 312 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 CARD9Q9H257 536 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 TRIT1Q9H3H1 467 aaKnown RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 RMI1Q9H9A7 625 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms