RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 SPAG4Q9NPE6 437 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 GALPQ9UBC7 116 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 YIPF1Q9Y548 306 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 SYNDIG1LA6NDD5 238 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 GSSP48637 474 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 NEK2P51955 445 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 CDH4P55283 916 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 ACAP2Q15057 778 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 COLGALT2Q8IYK4 626 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 HJURPQ8NCD3 748 aaPredicted RBP13.42□□□□□ -0.26
SIRPA-203ENST00000400068 MAGEC3Q8TD91 643 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 NOL11Q9H8H0 719 aaKnown RBP13.42□□□□□ -0.26
SIRPA-203ENST00000400068 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 K7ERQ8 282 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 AXIN1O15169 862 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 COCHO43405 550 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 LZTS3O60299 673 aaPredicted RBP13.42□□□□□ -0.26
SIRPA-203ENST00000400068 ZNF682O95780 498 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 NCK1P16333 377 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 SERINC3Q13530 473 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 AP5B1Q2VPB7 878 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
SIRPA-203ENST00000400068 LYSMD3Q7Z3D4 306 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 SPPL2CQ8IUH8 684 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 PTCD2Q8WV60 388 aaKnown RBP13.42□□□□□ -0.26
SIRPA-203ENST00000400068 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 CERS4Q9HA82 394 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 USP3Q9Y6I4 520 aa13.42□□□□□ -0.26
SIRPA-203ENST00000400068 PRMT5O14744 637 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ALDH1A2O94788 518 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 CTGFP29279 349 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 CDKN1CP49918 316 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 AGTR2P50052 363 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 CDKN2DP55273 166 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 FOLH1Q04609 750 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 EPGNQ6UW88 154 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 SPG21Q9NZD8 308 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 SPASTQ9UBP0 616 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 MATN2O00339 956 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ADGRF1Q5T601 910 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 DOK6Q6PKX4 331 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 TSGA13Q96PP4 275 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 IL12RB2Q99665 862 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 FAM126AQ9BYI3 521 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 JUNP05412 331 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ATP5BP06576 529 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 EFNA1P20827 205 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 GDF5P43026 501 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ABRQ12979 859 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 PDK3Q15120 406 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 FIBCD1Q8N539 461 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 SLC45A3Q96JT2 553 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ATG10Q9H0Y0 220 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
SIRPA-203ENST00000400068 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
SIRPA-203ENST00000400068 M0QZQ0 153 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 TRIM38O00635 465 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 FAM163BP0C2L3 166 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 ITPKAP23677 461 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 TRAF2Q12933 501 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 CDC16Q13042 620 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 ACOX1Q15067 660 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 EFL1Q7Z2Z2 1120 aaKnown RBP13.4□□□□□ -0.26
SIRPA-203ENST00000400068 CMTM8Q8IZV2 173 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
SIRPA-203ENST00000400068 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 PCNTO95613 3336 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 B4GALT3O60512 393 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 GSNP06396 782 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 ADAM17P78536 824 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 ZNF284Q2VY69 593 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 METTL21CQ5VZV1 264 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 RTN4RL1Q86UN2 441 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-203ENST00000400068 SELENOMQ8WWX9 145 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 TMEM248Q9NWD8 314 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 OR2AG2A6NM03 316 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 G3V2L1 256 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 ZNF197O14709 1029 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 MYO1DO94832 1006 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 AOC1P19801 751 aa13.4□□□□□ -0.26
SIRPA-203ENST00000400068 KCNA5P22460 613 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms