RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 TRNT1Q96Q11 434 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NUSAP1Q9BXS6 441 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 RBM38Q9H0Z9 239 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PCDHAC1Q9H158 963 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SIAEQ9HAT2 523 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 OR14I1A6ND48 311 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PRSS44E7EML9 344 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PLOD2O00469 737 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PIK3CGP48736 1102 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 P2RX3P56373 397 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CEACAM7Q14002 265 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 KCNJ11Q14654 390 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PCLAFQ15004 111 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PON2Q15165 354 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 FBXO39Q8N4B4 442 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 TTC29Q8NA56 475 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 OR8K3Q8NH51 312 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RXFP2Q8WXD0 754 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CASS4Q9NQ75 786 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 IL17RBQ9NRM6 502 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RGS18Q9NS28 235 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 ADGRE2Q9UHX3 823 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CPSF3Q9UKF6 684 aaKnown RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 NENFQ9UMX5 172 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PCDHGB6Q9Y5F9 930 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SPATA31A6Q5VVP1 1343 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 M0R233 179 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 WRBO00258 174 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 C2P06681 752 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SLC2A2P11168 524 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 HUNKP57058 714 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RAB5BP61020 215 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 EFR3AQ14156 821 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SMCO1Q147U7 214 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 MED22Q15528 200 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 HKDC1Q2TB90 917 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PIK3R6Q5UE93 754 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PMF1Q6P1K2 205 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 AHSA2Q719I0 299 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 LYSMD3Q7Z3D4 306 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 DNAJB7Q7Z6W7 309 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SNAPC3Q92966 411 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 ZNF641Q96N77 438 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 HOXD1Q9GZZ0 328 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 POLE4Q9NR33 117 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 DMAC2Q9NW81 257 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 EIF3KQ9UBQ5 218 aaKnown RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PCDHA2Q9Y5H9 948 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 TLL1O43897 1013 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 REM1O75628 298 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SEC14L2O76054 403 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 FAM163BP0C2L3 166 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 ANXA3P12429 323 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CDH13P55290 713 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CCNA1P78396 465 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 RBP5P82980 135 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PITPNAQ00169 270 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 FLI1Q01543 452 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 GPAT3Q53EU6 434 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CPB2Q96IY4 423 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 STUB1Q9UNE7 303 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PCDHGB2Q9Y5G2 931 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 MAGED1Q9Y5V3 778 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 HCN1O60741 890 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 NDUFS3O75489 264 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 XKR3Q5GH77 459 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 NIPA1Q7RTP0 329 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 LDHDQ86WU2 507 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 C4orf19Q8IY42 314 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CHCHD4Q8N4Q1 142 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 GDPD1Q8N9F7 314 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 TMBIM1Q969X1 311 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 PRR11Q96HE9 360 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 SAV1Q9H4B6 383 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-203ENST00000400060 CATSPERBQ9H7T0 1116 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 FBXO8Q9NRD0 319 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 GLTPQ9NZD2 209 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 TMEM181Q9P2C4 612 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
PTPRM-203ENST00000400060 TCRBV3S1A0A5B6 114 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 ATP6V1G2-DDX39BF2Z307 99 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 SOCS2O14508 198 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 MDM4O15151 490 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 CHST10O43529 356 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 SSX5O60225 188 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 FOXD2O60548 495 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-203ENST00000400060 IPO13O94829 963 aaKnown RBP9.91□□□□□ -0.82
PTPRM-203ENST00000400060 UNGP13051 313 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-203ENST00000400060 HGFP14210 728 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 PPIBP23284 216 aaKnown RBP9.91□□□□□ -0.82
PTPRM-203ENST00000400060 ALDH4A1P30038 563 aa9.91□□□□□ -0.82
PTPRM-203ENST00000400060 SLC6A4P31645 630 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms