RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NUDT4Q9NZJ9 180 aa17.58■□□□□ 0.41
HLA-DQB1-204ENST00000399084 KLHL42Q9P2K6 505 aa17.58■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MTF2Q9Y483 593 aaPredicted RBP17.58■□□□□ 0.41
HLA-DQB1-204ENST00000399084 GBF1Q92538 1859 aa17.58■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SNX2O60749 519 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TSPAN12O95859 305 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 IGSF6O95976 241 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TIMP1P01033 207 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CYBBP04839 570 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CHRM3P20309 590 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 EEF1DP29692 281 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 THOP1P52888 689 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CEACAM7Q14002 265 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TRIM25Q14258 630 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SAMD4BQ5PRF9 694 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ZDHHC20Q5W0Z9 365 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TXNDC8Q6A555 127 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 IZUMO2Q6UXV1 221 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SNX20Q7Z614 316 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 RBFAQ8N0V3 343 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PQLC1Q8N2U9 271 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 MIER2Q8N344 545 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SH3RF2Q8TEC5 729 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 LYSMD1Q96S90 227 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 AKTIPQ9H8T0 292 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ZFYVE1Q9HBF4 777 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 FIS1Q9Y3D6 152 aa17.58■□□□□ 0.4
HLA-DQB1-204ENST00000399084 A0A0J9YYE9 177 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 A6NHS1 94 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 BTN3A1O00481 513 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TRBC1P01850 177 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 RAG1P15918 1043 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ITGALP20701 1170 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GPX3P22352 226 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GABRR2P28476 465 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 RGS4P49798 205 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CDH13P55290 713 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 WDR5P61964 334 aaKnown RBP17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TSNQ15631 228 aaKnown RBP17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CTSL3PQ5NE16 218 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CLEC6AQ6EIG7 209 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GRAMD4Q6IC98 578 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TAS2R42Q7RTR8 314 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PNPLA1Q8N8W4 532 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SLC22A12Q96S37 553 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CLPBQ9H078 707 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ZBP1Q9H171 429 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SDR39U1Q9NRG7 319 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SCOCQ9UIL1 159 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CROTQ9UKG9 612 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ATP11BQ9Y2G3 1177 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PCDHGA7Q9Y5G6 932 aa17.57■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TRBV5-4A0A0C4DH59 114 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 DYTNA2CJ06 578 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 H3BNX3 289 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ACOT8O14734 319 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CFLARO15519 480 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CRCPO75575 148 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 STAMBPO95630 424 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CKMP06732 381 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ADH1AP07327 375 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 DDX6P26196 483 aaKnown RBP eCLIP17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SERPINA4P29622 427 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 FOXM1Q08050 763 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 C8orf82Q6P1X6 216 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TTC23LQ6PF05 361 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PDSS2Q86YH6 399 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TRPC4APQ8TEL6 797 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 DUS3LQ96G46 650 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ZNF382Q96SR6 550 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 LRRC3Q9BY71 257 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CCDC167Q9P0B6 97 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GNPTGQ9UJJ9 305 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 FCF1Q9Y324 198 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PPIL1Q9Y3C6 166 aa17.56■□□□□ 0.4
HLA-DQB1-204ENST00000399084 MRASO14807 208 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SMNDC1O75940 238 aaKnown RBP eCLIP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SIX3O95343 332 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 CLCN7P51798 805 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 SNRPD1P62314 119 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 PCBP2Q15366 365 aaKnown RBP eCLIP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 RARS2Q5T160 578 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 OGFRL1Q5TC84 451 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 REP15Q6BDI9 236 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GOLM1Q8NBJ4 401 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 ADCY4Q8NFM4 1077 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 GATA6Q92908 595 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 EXT2Q93063 718 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 LINGO1Q96FE5 620 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 NPAS2Q99743 824 aa17.55■□□□□ 0.4
HLA-DQB1-204ENST00000399084 LATS2Q9NRM7 1088 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1082.8 ms