RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NLGN4XQ8N0W4 816 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 NLGN4YQ8NFZ3 816 aaPredicted RBP16.21■□□□□ 0.19
DDR1-229ENST00000396342 GDAP1Q8TB36 358 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 ARRDC2Q8TBH0 407 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 SEMA4CQ9C0C4 833 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
DDR1-229ENST00000396342 ADNPQ9H2P0 1102 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 DTLQ9NZJ0 730 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 PRKAB1Q9Y478 270 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 PLEKHM1Q9Y4G2 1056 aa16.21■□□□□ 0.19
DDR1-229ENST00000396342 RP1P56715 2156 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 POLR1CO15160 346 aaPredicted RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 KMOO15229 486 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 RAD1O60671 282 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 WISP1O95388 367 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 SOD1P00441 154 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 GYPCP04921 128 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 FAM87AP0C7U9 286 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 UGT1A3P35503 534 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 PBX1P40424 430 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 SLC1A1P43005 524 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 ARSEP51690 589 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 IFI35P80217 286 aaPredicted RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 CDK18Q07002 472 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 PPIDQ08752 370 aaKnown RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 SEPT6Q14141 434 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 PCSK7Q16549 785 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 TBR1Q16650 682 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 QPCTQ16769 361 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 HENMT1Q5T8I9 393 aaKnown RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 ZDHHC20Q5W0Z9 365 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 ALS2CLQ60I27 953 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 RFLNAQ6ZTI6 216 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 ZNF761Q86XN6 746 aaPredicted RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 NKD1Q969G9 470 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 FAF2Q96CS3 445 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 AGAP3Q96P47 875 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 AGAP2Q99490 1192 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 ZCCHC2Q9C0B9 1178 aaKnown RBP16.2■□□□□ 0.18
DDR1-229ENST00000396342 OR2AG1Q9H205 316 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 MAGEE1Q9HCI5 957 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 TRIM39Q9HCM9 518 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 KLC4Q9NSK0 619 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 CPNE7Q9UBL6 633 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 KLHL3Q9UH77 587 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 PCDHB3Q9Y5E6 796 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 B3GALT1Q9Y5Z6 326 aa16.2■□□□□ 0.18
DDR1-229ENST00000396342 A0A0U1RQS6 177 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 SSU72P8A0A1W2PR75 194 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 MTSS1O43312 755 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 SPOPO43791 374 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 VEGFDO43915 354 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 NUAK1O60285 661 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 TNNT1P13805 278 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 HALP42357 657 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 NIPAL4Q0D2K0 466 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 TFDP2Q14188 446 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 GALNT3Q14435 633 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.19■□□□□ 0.18
DDR1-229ENST00000396342 ANKS6Q68DC2 871 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 LRRTM4Q86VH4 590 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 RHOT1Q8IXI2 618 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 RBM12BQ8IXT5 1001 aaKnown RBP16.19■□□□□ 0.18
DDR1-229ENST00000396342 TRAM1L1Q8N609 369 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 PTCD2Q8WV60 388 aaKnown RBP16.19■□□□□ 0.18
DDR1-229ENST00000396342 SLC25A18Q9H1K4 315 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 SLC25A51Q9H1U9 297 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 LUC7LQ9NQ29 371 aaKnown RBP16.19■□□□□ 0.18
DDR1-229ENST00000396342 GEMIN8Q9NWZ8 242 aaKnown RBP16.19■□□□□ 0.18
DDR1-229ENST00000396342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDR1-229ENST00000396342 TBC1D29Q9UFV1 150 aa16.19■□□□□ 0.18
DDR1-229ENST00000396342 ZNF462Q96JM2 2506 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 GCN1Q92616 2671 aaKnown RBP16.18■□□□□ 0.18
DDR1-229ENST00000396342 DNAJC6O75061 913 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 RASSF9O75901 435 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 IDSP22304 550 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
DDR1-229ENST00000396342 NR2C2P49116 596 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 CSRP3P50461 194 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 TAS2R40P59535 323 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 DCDC1P59894 354 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 MC2RQ01718 297 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 FOXM1Q08050 763 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 SKOR2Q2VWA4 1001 aaPredicted RBP16.18■□□□□ 0.18
DDR1-229ENST00000396342 LRRC38Q5VT99 294 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 KLHL35Q6PF15 583 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 ESX1Q8N693 406 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 PQLC3Q8N755 202 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 EXD3Q8N9H8 876 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 SLC35G2Q8TBE7 412 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 RAPGEF5Q92565 580 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 GLYATL1Q969I3 302 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 CXorf40BQ96DE9 158 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 FBXO8Q9NRD0 319 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 OCIAD1Q9NX40 245 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
DDR1-229ENST00000396342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms