RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SSR1P43307 286 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 DCDC1P59894 354 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 QPCTQ16769 361 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ANKS6Q68DC2 871 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 CHST15Q7LFX5 561 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 NLGN4XQ8N0W4 816 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 LPCAT1Q8NF37 534 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 NLGN4YQ8NFZ3 816 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 JPH3Q8WXH2 748 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 PCYT1BQ9Y5K3 369 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ADGRG1Q9Y653 693 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 COL12A1Q99715 3063 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 LILRA5A6NI73 299 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 MMP2P08253 660 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 CCR10P46092 362 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 TPM4P67936 248 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 FANCCQ00597 558 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 PPIDQ08752 370 aaKnown RBP17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 ABHD18Q0P651 414 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 MAP7Q14244 749 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 PQLC3Q8N755 202 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 KIAA1143Q96AT1 154 aaPredicted RBP17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 RAD18Q9NS91 495 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 LUC7L2Q9Y383 392 aaKnown RBP17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 TTLL3Q9Y4R7 772 aa17.3■□□□□ 0.36
SNRPA1-202ENST00000394082 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 TRBV23OR9-2A0A075B6M9 112 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 PYCARD-AS1I3L0S3 204 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 TOX3O15405 576 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 GRID2O43424 1007 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 HNRNPH3P31942 346 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 POLE2P56282 527 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 GBE1Q04446 702 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 SLC10A2Q12908 348 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 KCNAB2Q13303 367 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 NFKBIBQ15653 356 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 SLC14A2Q15849 920 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF761Q86XN6 746 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 PLXDC1Q8IUK5 500 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 PHYKPLQ8IUZ5 450 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 NCSTNQ92542 709 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF830Q96NB3 372 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 ZSCAN5AQ9BUG6 496 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 TRIM39Q9HCM9 518 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 CPNE7Q9UBL6 633 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 HECTD1Q9ULT8 2610 aa17.29■□□□□ 0.36
SNRPA1-202ENST00000394082 CHUKO15111 745 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 C9P02748 559 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 H2AFZP0C0S5 128 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 ACP5P13686 325 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 XRCC1P18887 633 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 UBASH3AP57075 661 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 UBE2IP63279 158 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 MC1RQ01726 317 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 NFATC2Q13469 925 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 H2AFVQ71UI9 128 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 CNTD1Q8N815 330 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 RNF157Q96PX1 679 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 TRIB3Q96RU7 358 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 SRPK1Q96SB4 655 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 GPN2Q9H9Y4 310 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 ZFYVE1Q9HBF4 777 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 KCNK6Q9Y257 313 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 PRKAB1Q9Y478 270 aa17.28■□□□□ 0.36
SNRPA1-202ENST00000394082 POLR1CO15160 346 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 DLGAP3O95886 979 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 JCHAINP01591 159 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 GYPCP04921 128 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 KDELR1P24390 212 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 CD86P42081 329 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 TAS2R40P59535 323 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 NFKB2Q00653 900 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 TRAM1L1Q8N609 369 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 CTNNBL1Q8WYA6 563 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 TADA1Q96BN2 335 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 EID2BQ96D98 161 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 SIDT1Q9NXL6 827 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 CTTNBP2NLQ9P2B4 639 aa17.27■□□□□ 0.36
SNRPA1-202ENST00000394082 PRR19A6NJB7 356 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 A8MU76 341 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 KCNK1O00180 336 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 STK17BO94768 372 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC25A14O95258 325 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF8P17098 575 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms