RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TBCDQ9BTW9 1192 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CINPQ9BW66 212 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 RAB33BQ9H082 229 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 NT5C3AQ9H0P0 336 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 MGAT4CQ9UBM8 478 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DENND4BO75064 1496 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A20PA6NIJ5 464 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ADAMDEC1O15204 470 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 MAPK13O15264 365 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CHEK2O96017 543 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 IL1BP01584 269 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 KRT3P12035 628 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 GNSP15586 552 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ITGB8P26012 769 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 FMO5P49326 533 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 NDUFV1P49821 464 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 KRT76Q01546 638 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CUL3Q13618 768 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LRIT3Q3SXY7 679 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 HERC4Q5GLZ8 1057 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 FAM76BQ5HYJ3 339 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 BRAT1Q6PJG6 821 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 LRIG3Q6UXM1 1119 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TRIM74Q86UV6 250 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TRIM73Q86UV7 250 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 AQP12AQ8IXF9 295 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TMEM52Q8NDY8 209 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 BBS1Q8NFJ9 593 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DNERQ8NFT8 737 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 HEXIM2Q96MH2 286 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 RAD21L1Q9H4I0 556 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 SUGCTQ9HAC7 445 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TCF7L2Q9NQB0 619 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ATXN10Q9UBB4 475 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PADI2Q9Y2J8 665 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TMEM184BQ9Y519 407 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 MACROD2A1Z1Q3 448 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TRIAP1O43715 76 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 MITFO75030 526 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 ATP9AO75110 1047 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 OR6A2O95222 327 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 AMHP03971 560 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CHRM4P08173 479 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PCNAP12004 261 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 VIPR2P41587 438 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CASP3P42574 277 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TIRAPP58753 221 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 HSD11B2P80365 405 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 PPIGQ13427 754 aaKnown RBP eCLIP3.54□□□□□ -1.844e-6■■□□□ 12.9
XRN1-202ENST00000392981 FGFBP1Q14512 234 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 UGT3A2Q3SY77 523 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CES4AQ5XG92 561 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 TAS1R1Q7RTX1 841 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 SPPL2CQ8IUH8 684 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 ZNF397Q8NF99 534 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 OR52E1Q8NGJ3 308 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 CCNL2Q96S94 520 aaPredicted RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 GLT8D2Q9H1C3 349 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 NOL11Q9H8H0 719 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 PTTG3PQ9NZH4 202 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 NDRG4Q9ULP0 352 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 STARD13Q9Y3M8 1113 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 HBS1LQ9Y450 684 aaKnown RBP3.54□□□□□ -1.84
XRN1-202ENST00000392981 XIRP2A4UGR9 3374 aa3.54□□□□□ -1.84
XRN1-202ENST00000392981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.53□□□□□ -1.84
XRN1-202ENST00000392981 A0A1W2PR48 441 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ANKRD30BLA7E2S9 258 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TEX46H3BTG2 121 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 FFAR3O14843 346 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PPM1DO15297 605 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 GPR42O15529 346 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CYP26A1O43174 497 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MED24O75448 989 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RECQL4O94761 1208 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 C22orf31O95567 290 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CEACAM5P06731 702 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 EPXP11678 715 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 BMI1P35226 326 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 GZMKP49863 264 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LOXL3P58215 753 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MTX1Q13505 466 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NPY5RQ15761 445 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ARSKQ6UWY0 536 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ZNF813Q6ZN06 617 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 FAM214BQ7L5A3 538 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 C1orf87Q8N0U7 546 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CFAP52Q8N1V2 620 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TTLL6Q8N841 843 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MBD3L2Q8NHZ7 208 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 RSC1A1Q92681 617 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PANX2Q96RD6 677 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SH3GL1Q99961 368 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 BCL7BQ9BQE9 202 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NFKBIZQ9BYH8 718 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CENPHQ9H3R5 247 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ROPN1Q9HAT0 212 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 DNMT3BQ9UBC3 853 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 UBQLN2Q9UHD9 624 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 COMMD3-BMI1R4GMX3 469 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ARHGEF11O15085 1522 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms