RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MAXP61244 160 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 IL10RBQ08334 325 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 SLC10A7Q0GE19 358 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 TRAF2Q12933 501 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 KCNAB1Q14722 419 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 TPD52L1Q16890 204 aaPredicted RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 PWWP2BQ6NUJ5 590 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 TMEM26Q6ZUK4 368 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 USP45Q70EL2 814 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 EXD1Q8NHP7 514 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 MR1Q95460 341 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 SCRN2Q96FV2 425 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 SMIM14Q96QK8 99 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 DHX35Q9H5Z1 703 aaKnown RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 RUBCNLQ9H714 662 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 NOD2Q9HC29 1040 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 GPR83Q9NYM4 423 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 ENTPD4Q9Y227 616 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 ITPR2Q14571 2701 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 ANKRD17O75179 2603 aaKnown RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 ANKRD62A6NC57 917 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 PRSS44E7EML9 344 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 LRRTM2O43300 516 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 SOCS5O75159 536 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 TMEM63AO94886 807 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 CYP1A1P04798 512 aaPredicted RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 FOLR1P15328 257 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 ERCC2P18074 760 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 TUBB3Q13509 450 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 SEPT7Q16181 437 aaKnown RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 ZXDCQ2QGD7 858 aaPredicted RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 ARMC12Q5T9G4 340 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 KLHDC7AQ5VTJ3 777 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 LRRC66Q68CR7 880 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 CYB5D1Q6P9G0 228 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 PHYKPLQ8IUZ5 450 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 ARHGAP12Q8IWW6 846 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 AVL9Q8NBF6 648 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 EPS8L1Q8TE68 723 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 RSC1A1Q92681 617 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 COX14Q96I36 57 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 PSKH2Q96QS6 385 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 NUDCD1Q96RS6 583 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 MLPHQ9BV36 600 aaPredicted RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 ILKAPQ9H0C8 392 aaPredicted RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 VPS16Q9H269 839 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 ARFGAP3Q9NP61 516 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 KLC4Q9NSK0 619 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 ADAM22Q9P0K1 906 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 SCHIP1Q9P0W5 487 aaPredicted RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 RWDD2AQ9UIY3 292 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 SIK3Q9Y2K2 1263 aa9.51□□□□□ -0.89
IFT88-203ENST00000389373 COPG1Q9Y678 874 aaKnown RBP9.51□□□□□ -0.89
IFT88-203ENST00000389373 SPENQ96T58 3664 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PDZK1P1A8MUH7 402 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 GRID2O43424 1007 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 CEACAM4O75871 244 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PGLSO95336 258 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PYGLP06737 847 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PDHA1P08559 390 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 EBLN1P0CF75 366 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 DESP17661 470 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 NELFEP18615 380 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 XRCC1P18887 633 aaPredicted RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 LPOP22079 712 aaPredicted RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 SLC19A1P41440 591 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 NSFP46459 744 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 ARL4DP49703 201 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 EPHB1P54762 984 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PER3P56645 1201 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 UBE2IP63279 158 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 FMO1Q01740 532 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 CDR2Q01850 454 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PTSQ03393 145 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 ITKQ08881 620 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 CA9Q16790 459 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 VWA3BQ502W6 1294 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 TDRD12Q587J7 1177 aaKnown RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 HSP90AA4PQ58FG1 418 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 ZNF648Q5T619 568 aaPredicted RBP9.5□□□□□ -0.89
IFT88-203ENST00000389373 FAM69BQ5VUD6 431 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 DPY19L2P1Q6NXN4 242 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 DNAJC24Q6P3W2 148 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 ZNF677Q86XU0 584 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 HPS6Q86YV9 775 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 NDUFAF2Q8N183 169 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 PGBD5Q8N414 524 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
IFT88-203ENST00000389373 ARFGAP1Q8N6T3 406 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 KLHL6Q8WZ60 621 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 ZDHHC12Q96GR4 267 aa9.5□□□□□ -0.89
IFT88-203ENST00000389373 MCEEQ96PE7 176 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms