RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 VN1R3Q9BXE9 311 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 POLR1BQ9H9Y6 1135 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 MAGEE1Q9HCI5 957 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 INIPQ9NRY2 104 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 TMEM248Q9NWD8 314 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 AAR2Q9Y312 384 aaKnown RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NYNRINQ9P2P1 1898 aaKnown RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 FAM95CA0A1B0GW59 222 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 A0A1W2PPW3 197 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 CLOCKO15516 846 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 TLR5O60602 858 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 ANXA9O76027 345 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 CCNA2P20248 432 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 SAT1P21673 171 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NMBRP28336 390 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 CAPGP40121 348 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 HALP42357 657 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 HLCSP50747 726 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 POU4F1Q01851 419 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 OLIG2Q13516 323 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 FAM83EQ2M2I3 478 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 CCDC92Q53HC0 331 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 FGD3Q5JSP0 725 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 AARS2Q5JTZ9 985 aaKnown RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 GPR107Q5VW38 600 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 ANKRD26P1Q6NSI1 321 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 EPHX4Q8IUS5 362 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 SLC22A9Q8IVM8 553 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 MINDY1Q8N5J2 469 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 USP33Q8TEY7 942 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 RAB2BQ8WUD1 216 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NXNL1Q96CM4 212 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NRBF2Q96F24 287 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 FCRL5Q96RD9 977 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 CDK5RAP1Q96SZ6 601 aaKnown RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NOL6Q9H6R4 1146 aaKnown RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 GLOD4Q9HC38 313 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 GIN1Q9NXP7 522 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 SMPD3Q9NY59 655 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-202ENST00000381990 ACTR3BQ9P1U1 418 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 ERGIC3Q9Y282 383 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 NDUFAF1Q9Y375 327 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 TMED5Q9Y3A6 229 aa8.9□□□□□ -0.98
GPNMB-202ENST00000381990 COL4A6Q14031 1691 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 ABHD14A-ACY1A0A1B0GW23 586 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 TRIM43BA6NCK2 446 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 SAC3D1A6NKF1 404 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 CFAP99D6REC4 459 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 H0YAE9 185 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 K7EPI3 171 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 IPO13O94829 963 aaKnown RBP8.9□□□□□ -0.99
GPNMB-202ENST00000381990 CLTBP09497 229 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 RPL17P18621 184 aaKnown RBP8.9□□□□□ -0.99
GPNMB-202ENST00000381990 ATP6V1B2P21281 511 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 BMXP51813 675 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 C1QTNF8P60827 252 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 FOXM1Q08050 763 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 NFATC3Q12968 1075 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 BTG3Q14201 252 aaPredicted RBP8.9□□□□□ -0.99
GPNMB-202ENST00000381990 COQ5Q5HYK3 327 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 PCID2Q5JVF3 399 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 NANOGP8Q6NSW7 305 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 CNSTQ6PJW8 725 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 KCTD8Q6ZWB6 473 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 OTOP3Q7RTS5 596 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 CUZD1Q86UP6 607 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 SLC41A1Q8IVJ1 513 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 OVCA2Q8WZ82 227 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 FATE1Q969F0 183 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 ACDQ96AP0 544 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 MYRFLQ96LU7 910 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF558Q96NG5 402 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 NEURL2Q9BR09 285 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 CCSER2Q9H7U1 834 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 ACSS2Q9NR19 701 aa8.9□□□□□ -0.99
GPNMB-202ENST00000381990 AFF4Q9UHB7 1163 aaKnown RBP8.9□□□□□ -0.99
GPNMB-202ENST00000381990 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.99
GPNMB-202ENST00000381990 LTBP2Q14767 1821 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 DRGXA6NNA5 263 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 SOD2P04179 222 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TFPTP0C1Z6 253 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 JUNBP17275 347 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 MAP4P27816 1152 aaKnown RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 AVPR1AP37288 418 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 SLC12A2P55011 1212 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 SPOUT1Q5T280 376 aaKnown RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CCNYL2Q5T2Q4 361 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 AGAP9Q5VTM2 703 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 RAP1GAP2Q684P5 730 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 FBXL22Q6P050 247 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 PKN3Q6P5Z2 889 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 LINC00299Q6ZSB3 139 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TFAP2DQ7Z6R9 452 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TRPV3Q8NET8 790 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 OR13F1Q8NGS4 319 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CYP2S1Q96SQ9 504 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CLSTN3Q9BQT9 956 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms