RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ZFYVE19Q96K21 471 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 CMTM3Q96MX0 182 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 CGRRF1Q99675 332 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 ATP13A1Q9HD20 1204 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 WDR6Q9NNW5 1121 aaKnown RBP5.7□□□□□ -1.5
RFC1-202ENST00000381897 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
RFC1-202ENST00000381897 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.7□□□□□ -1.5
RFC1-202ENST00000381897 MSRAQ9UJ68 235 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 ANAPC2Q9UJX6 822 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 ZNF221Q9UK13 617 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 IPPQ9Y573 584 aa5.7□□□□□ -1.5
RFC1-202ENST00000381897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 FIGNL2A6NMB9 653 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 M0QYV0 167 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 TRIM24O15164 1050 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SUSD5O60279 629 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SNNO75324 88 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 DGAT1O75907 488 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 DNAJB5O75953 348 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SLURP2P0DP57 97 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SNHG28P0DPA3 235 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CYP4B1P13584 511 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 TPSB2P20231 275 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 FGFR3P22607 806 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SOX6P35712 828 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 NR2C2P49116 596 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 AP1S2P56377 157 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 GJA9P57773 515 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 RUNX1T1Q06455 604 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 APOFQ13790 326 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 HNF4GQ14541 408 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 MFSD10Q14728 455 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 POLD3Q15054 466 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 TPSAB1Q15661 275 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 DGKDQ16760 1214 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 BTBD16Q32M84 506 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PPP2R2DQ66LE6 453 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 KCTD8Q6ZWB6 473 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SPERTQ8NA61 448 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CHTF18Q8WVB6 975 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 POP5Q969H6 163 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 ZNF560Q96MR9 790 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 HEPHQ9BQS7 1158 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 EBF4Q9BQW3 602 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 MXRA8Q9BRK3 442 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CHID1Q9BWS9 393 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 RTFDC1Q9BY42 306 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 ST6GALNAC4Q9H4F1 302 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 OPA3Q9H6K4 179 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 NMRAL1Q9HBL8 299 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 NGBQ9NPG2 151 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 VAV3Q9UKW4 847 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PSME2Q9UL46 239 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 NDUFAF1Q9Y375 327 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CAMTA1Q9Y6Y1 1673 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PRRG1O14668 218 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 STX7O15400 261 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 SEPT4O43236 478 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PLIN3O60664 434 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SEC24AO95486 1093 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 OXSR1O95747 527 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 HOXB6P17509 224 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 NFKB1P19838 968 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 GSTM2P28161 218 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CAPGP40121 348 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 INPP1P49441 399 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 RGS19P49795 217 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 YWHAZP63104 245 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 MPP1Q00013 466 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 MYBPC1Q00872 1141 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 MTM1Q13496 603 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 USP10Q14694 798 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 CA9Q16790 459 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CDO1Q16878 200 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 DUOXA2Q1HG44 320 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PLEKHN1Q494U1 663 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 AGKQ53H12 422 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 CORO6Q6QEF8 472 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 OTOP2Q7RTS6 562 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 TXNRD3Q86VQ6 643 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 BBS7Q8IWZ6 715 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SP8Q8IXZ3 490 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 DDX60Q8IY21 1712 aaKnown RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 ANKK1Q8NFD2 765 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 HARBI1Q96MB7 349 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PPP1R2P1Q96PQ5 205 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 KCTD15Q96SI1 283 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 PKP2Q99959 881 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 HSD17B14Q9BPX1 270 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SARGQ9BW04 601 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 OSBPL10Q9BXB5 764 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 IDI2Q9BXS1 227 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 VTA1Q9NP79 307 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
RFC1-202ENST00000381897 MORF4L1Q9UBU8 362 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 PCDHGC3Q9UN70 934 aa5.69□□□□□ -1.5
RFC1-202ENST00000381897 ERGIC3Q9Y282 383 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms