RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SLC2A4P14672 509 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 ERCC2P18074 760 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 RPL7AP62424 266 aaKnown RBP17.12■□□□□ 0.33
HMGN1-203ENST00000380748 ZNF235Q14590 738 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMGN1-203ENST00000380748 FAM199XQ6PEV8 388 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-203ENST00000380748 USP45Q70EL2 814 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 PPP1R3BQ86XI6 285 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 NUDCD1Q96RS6 583 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 RIOK2Q9BVS4 552 aaKnown RBP17.12■□□□□ 0.33
HMGN1-203ENST00000380748 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 CSMD2Q7Z408 3487 aa17.12■□□□□ 0.33
HMGN1-203ENST00000380748 TOX3O15405 576 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-203ENST00000380748 DPM1O60762 260 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 UBXN7O94888 489 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 GRNP28799 593 aaKnown RBP17.11■□□□□ 0.33
HMGN1-203ENST00000380748 PTPN4P29074 926 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 PTGIRP43119 386 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 NSFP46459 744 aaKnown RBP17.11■□□□□ 0.33
HMGN1-203ENST00000380748 MAXP61244 160 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 PTSQ03393 145 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 TRIM72Q6ZMU5 477 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 RFX8Q6ZV50 586 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 ZNF765Q7L2R6 523 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 RBMXL3Q8N7X1 1067 aaKnown RBP17.11■□□□□ 0.33
HMGN1-203ENST00000380748 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 SEC14L1Q92503 715 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 VPS16Q9H269 839 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
HMGN1-203ENST00000380748 VPS18Q9P253 973 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 PDZD2O15018 2839 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 AKAP9Q99996 3911 aa17.11■□□□□ 0.33
HMGN1-203ENST00000380748 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 DAPK3O43293 454 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 CEACAM4O75871 244 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 CBX6O95503 412 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PEX11BO96011 259 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 OGDHQ02218 1023 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 ARMC12Q5T9G4 340 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PRSS42Q7Z5A4 293 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PHF13Q86YI8 300 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-203ENST00000380748 FDCSPQ8NFU4 85 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PIH1D2Q8WWB5 315 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 RSC1A1Q92681 617 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 SNRNP40Q96DI7 357 aaKnown RBP17.1■□□□□ 0.33
HMGN1-203ENST00000380748 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 KCTD15Q96SI1 283 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-203ENST00000380748 NUDT9Q9BW91 350 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 GPR87Q9BY21 358 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 UCK1Q9HA47 277 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-203ENST00000380748 CNOT6Q9ULM6 557 aaKnown RBP17.1■□□□□ 0.33
HMGN1-203ENST00000380748 PPIL1Q9Y3C6 166 aa17.1■□□□□ 0.33
HMGN1-203ENST00000380748 OR5K4A6NMS3 321 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
HMGN1-203ENST00000380748 CALB1P05937 261 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PYGLP06737 847 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PDHA1P08559 390 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 AMD1P17707 334 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 VARSP26640 1264 aaKnown RBP17.09■□□□□ 0.33
HMGN1-203ENST00000380748 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-203ENST00000380748 CLEC16AQ2KHT3 1053 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 ZRANB3Q5FWF4 1079 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PPP1R15BQ5SWA1 713 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 NLRP8Q86W28 1048 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 MARVELD3Q96A59 401 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PNPLA2Q96AD5 504 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 MOCOSQ96EN8 888 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 RANBP9Q96S59 729 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PEBP4Q96S96 227 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 GANQ9H2C0 597 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 ASF1BQ9NVP2 202 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 PCDHGB7Q9Y5F8 929 aa17.09■□□□□ 0.33
HMGN1-203ENST00000380748 NF1P21359 2839 aa17.08■□□□□ 0.33
HMGN1-203ENST00000380748 DIDO1Q9BTC0 2240 aaKnown RBP17.08■□□□□ 0.33
HMGN1-203ENST00000380748 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
HMGN1-203ENST00000380748 ANKRD62A6NC57 917 aa17.08■□□□□ 0.32
HMGN1-203ENST00000380748 NELFEP18615 380 aaKnown RBP17.08■□□□□ 0.32
HMGN1-203ENST00000380748 HSPA9P38646 679 aaKnown RBP17.08■□□□□ 0.32
HMGN1-203ENST00000380748 STC1P52823 247 aa17.08■□□□□ 0.32
HMGN1-203ENST00000380748 RPS15P62841 145 aaKnown RBP17.08■□□□□ 0.32
HMGN1-203ENST00000380748 TUBB3Q13509 450 aa17.08■□□□□ 0.32
HMGN1-203ENST00000380748 KCNAB1Q14722 419 aa17.08■□□□□ 0.32
HMGN1-203ENST00000380748 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms