RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 G3BP2Q9UN86 482 aaKnown RBP22.94■■□□□ 1.26
VPS16-201ENST00000380443 DHRS7Q9Y394 339 aa22.94■■□□□ 1.26
VPS16-201ENST00000380443 A0A1W2PQ67 120 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 A0A1W2PRU2 124 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 K7ERQ8 282 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 CLASP2O75122 1294 aaKnown RBP22.93■■□□□ 1.26
VPS16-201ENST00000380443 MLYCDO95822 493 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 RPS17P08708 135 aaKnown RBP22.93■■□□□ 1.26
VPS16-201ENST00000380443 ITGALP20701 1170 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 ATP6V1C1P21283 382 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 SH3BP2P78314 561 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 PTK2BQ14289 1009 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 MUM1Q2TAK8 710 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 GPR33Q49SQ1 333 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 KANK2Q63ZY3 851 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 EXT2Q93063 718 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 CORO1BQ9BR76 489 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 NUSAP1Q9BXS6 441 aaKnown RBP22.93■■□□□ 1.26
VPS16-201ENST00000380443 MRPL1Q9BYD6 325 aaKnown RBP22.93■■□□□ 1.26
VPS16-201ENST00000380443 TM6SF2Q9BZW4 377 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 TNFRSF12AQ9NP84 129 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 MID1IP1Q9NPA3 183 aa22.93■■□□□ 1.26
VPS16-201ENST00000380443 SCAMP3O14828 347 aaKnown RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 SMAD6O43541 496 aaKnown RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 TSPAN12O95859 305 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CHRM3P20309 590 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CLCQ05315 142 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 TSNQ15631 228 aaKnown RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 CRY1Q16526 586 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 GRAMD4Q6IC98 578 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 HOMEZQ8IX15 550 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 RBFAQ8N0V3 343 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 DTX3LQ8TDB6 740 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 RCN3Q96D15 328 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CCT7Q99832 543 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CEP44Q9C0F1 390 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 BATF3Q9NR55 127 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 ZMYM5Q9UJ78 669 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 HS3ST2Q9Y278 367 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 PPIL1Q9Y3C6 166 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 FIS1Q9Y3D6 152 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 MTF2Q9Y483 593 aaPredicted RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 TRBV5-4A0A0C4DH59 114 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CAPN8A6NHC0 703 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 ZBBXA8MT70 800 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 PSMD12O00232 456 aaPredicted RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 BTN3A1O00481 513 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 GRM6O15303 877 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 MAP3K7O43318 606 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 NIPSNAP2O75323 286 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 EEF1DP29692 281 aaKnown RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 STX1BP61266 288 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 ARHGAP15Q53QZ3 475 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 TMEM240Q5SV17 173 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 GPSM1Q86YR5 675 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 LEMD2Q8NC56 503 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 ZNF570Q96NI8 536 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 CPEB1Q9BZB8 566 aaKnown RBP22.92■■□□□ 1.26
VPS16-201ENST00000380443 GNPTGQ9UJJ9 305 aa22.92■■□□□ 1.26
VPS16-201ENST00000380443 OR1I1O60431 355 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 RPSAP08865 295 aaKnown RBP22.91■■□□□ 1.26
VPS16-201ENST00000380443 CTPS1P17812 591 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 CD70P32970 193 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 CLCN7P51798 805 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 SESN3P58005 492 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 FASTKQ14296 549 aaKnown RBP22.91■■□□□ 1.26
VPS16-201ENST00000380443 DMC1Q14565 340 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 PITRM1Q5JRX3 1037 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 TPGS1Q6ZTW0 290 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 CHCHD4Q8N4Q1 142 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 SIDT2Q8NBJ9 832 aaKnown RBP22.91■■□□□ 1.26
VPS16-201ENST00000380443 LINGO1Q96FE5 620 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 TCF25Q9BQ70 676 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 SLC25A23Q9BV35 468 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 CLPBQ9H078 707 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 NMRK1Q9NWW6 199 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 NUDT4Q9NZJ9 180 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 PTPRSQ13332 1948 aa22.91■■□□□ 1.26
VPS16-201ENST00000380443 CDC7O00311 574 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 SNX2O60749 519 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 PTPN2P17706 415 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 CDH13P55290 713 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 SHHQ15465 462 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 CDKN3Q16667 212 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 HACD2Q6Y1H2 254 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 RPS27LQ71UM5 84 aaKnown RBP22.9■■□□□ 1.26
VPS16-201ENST00000380443 PAF1Q8N7H5 531 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 MRPL43Q8N983 215 aaKnown RBP22.9■■□□□ 1.26
VPS16-201ENST00000380443 SP7Q8TDD2 431 aaPredicted RBP22.9■■□□□ 1.26
VPS16-201ENST00000380443 ZNF483Q8TF39 744 aaPredicted RBP22.9■■□□□ 1.26
VPS16-201ENST00000380443 BHMTQ93088 406 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 EID2BQ96D98 161 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 WDR41Q9HAD4 459 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 TNPO3Q9Y5L0 923 aaKnown RBP22.9■■□□□ 1.26
VPS16-201ENST00000380443 DNAJC15Q9Y5T4 150 aa22.9■■□□□ 1.26
VPS16-201ENST00000380443 C1orf232A0A0U1RR37 186 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 ZNF821O75541 412 aaPredicted RBP22.89■■□□□ 1.26
VPS16-201ENST00000380443 PDE5AO76074 875 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 SIX3O95343 332 aaPredicted RBP22.89■■□□□ 1.26
VPS16-201ENST00000380443 SNRPB2P08579 225 aaKnown RBP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms