RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 TMEM45AQ9NWC5 275 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 TJP2Q9UDY2 1190 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 OSGIN1Q9UJX0 560 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 PNMA8BQ9ULN7 279 aaPredicted RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 PCDHGA8Q9Y5G5 932 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 CNTNAP1P78357 1384 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 KCNK2O95069 426 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 SLC4A1P02730 911 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 RPLP0P05388 317 aaKnown RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 OLR1P78380 273 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 IL1RL1Q01638 556 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 CD47Q08722 323 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 NFIAQ12857 509 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 BRMS1LQ5PSV4 323 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 SH3PXD2AQ5TCZ1 1133 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 APOBEC3HQ6NTF7 200 aaKnown RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 TAS1R3Q7RTX0 852 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 P3H2Q8IVL5 708 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 CENPLQ8N0S6 344 aaPredicted RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 OR6F1Q8NGZ6 308 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 MYDGFQ969H8 173 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 YIPF6Q96EC8 236 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 DMRTB1Q96MA1 342 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 LGMNQ99538 433 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 MRIQ9BWK5 157 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 C1QTNF1Q9BXJ1 281 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 CHST12Q9NRB3 414 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 SRP68Q9UHB9 627 aaKnown RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 CYTH4Q9UIA0 394 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 SNX7Q9UNH6 387 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 AAR2Q9Y312 384 aaKnown RBP7.22□□□□□ -1.25
DDX58-202ENST00000379883 PCDHGB6Q9Y5F9 930 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 LYVE1Q9Y5Y7 322 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 TAF1LQ8IZX4 1826 aa7.22□□□□□ -1.25
DDX58-202ENST00000379883 RBBP6Q7Z6E9 1792 aaKnown RBP7.21□□□□□ -1.25
DDX58-202ENST00000379883 TMCC2O75069 709 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 FADS2O95864 444 aaKnown RBP7.21□□□□□ -1.25
DDX58-202ENST00000379883 SLC35E2BP0CK96 405 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 CD1EP15812 388 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 NCK1P16333 377 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 SP4Q02446 784 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 TARDBPQ13148 414 aaKnown RBP eCLIP7.21□□□□□ -1.25
DDX58-202ENST00000379883 ACAP2Q15057 778 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 GOLGA7BQ2TAP0 167 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 ESCO2Q56NI9 601 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 SPESP1Q6UW49 350 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 LCLAT1Q6UWP7 414 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 SIAH1Q8IUQ4 282 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 IL17RDQ8NFM7 739 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 OR9I1Q8NGQ6 314 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 BPIFB1Q8TDL5 484 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 TMEM125Q96AQ2 219 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 SLC39A13Q96H72 371 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 SETD4Q9NVD3 440 aa7.21□□□□□ -1.25
DDX58-202ENST00000379883 TRMT6Q9UJA5 497 aaKnown RBP7.21□□□□□ -1.25
DDX58-202ENST00000379883 ATP6AP2A0A1C7CYW4 349 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 GMPRP36959 345 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 GRM5P41594 1212 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 RGS7P49802 495 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 NCS1P62166 190 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 PGM5Q15124 567 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 FBXO43Q4G163 708 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 CDONQ4KMG0 1287 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 ZC3H12BQ5HYM0 836 aaKnown RBP7.21□□□□□ -1.26
DDX58-202ENST00000379883 NCBP2-AS2Q69YL0 99 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 LARP4Q71RC2 724 aaKnown RBP eCLIP7.21□□□□□ -1.26
DDX58-202ENST00000379883 FAM35AQ86V20 835 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 ZNF567Q8N184 647 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 NATD1Q8N6N6 113 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 PSD4Q8NDX1 1056 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 LRRN4Q8WUT4 740 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 NCLNQ969V3 563 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 REXO5Q96IC2 774 aaKnown RBP7.21□□□□□ -1.26
DDX58-202ENST00000379883 UBXN10Q96LJ8 280 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 RETREG1Q9H6L5 497 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 AKTIPQ9H8T0 292 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 ING3Q9NXR8 418 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 PCDHA9Q9Y5H5 950 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 DOT1LQ8TEK3 1739 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 ZCWPW2A0A1B0GU75 182 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 DDTLA6NHG4 134 aaPredicted RBP7.21□□□□□ -1.26
DDX58-202ENST00000379883 EEF2KO00418 725 aaKnown RBP7.21□□□□□ -1.26
DDX58-202ENST00000379883 AZIN1O14977 448 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 USP12O75317 370 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 CILPO75339 1184 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 WDR47O94967 919 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 PRLP01236 227 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 MAGP20916 626 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 CTSKP43235 329 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 HTR3AP46098 478 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 CLCN5P51795 746 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 YWHAHQ04917 246 aaPredicted RBP7.21□□□□□ -1.26
DDX58-202ENST00000379883 RUNX1T1Q06455 604 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 KCNAB2Q13303 367 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 PPP1R3AQ16821 1122 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 DDR2Q16832 855 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 ZNF691Q5VV52 312 aa7.21□□□□□ -1.26
DDX58-202ENST00000379883 CPXCR1Q8N123 301 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms