RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CDH26Q8IXH8 852 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 OR4D10Q8NGI6 311 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SMG7Q92540 1137 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 BIRC7Q96CA5 298 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PIGUQ9H490 435 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 RANGRFQ9HD47 186 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PAK6Q9NQU5 681 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ERVK-18Q9QC07 812 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 H2AFYO75367 372 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
NPHP4-202ENST00000378161 LCKP06239 509 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CYP3A4P08684 503 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TSPAN19P0C672 248 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 PDGFRAP16234 1089 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 RAB3BP20337 219 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 C2CD6Q53TS8 623 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 GPR156Q8NFN8 814 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 OR6B3Q8NGW1 331 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TMEM143Q96AN5 459 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 ASB9Q96DX5 294 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 NPAS2Q99743 824 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TCEAL7Q9BRU2 100 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SPON1Q9HCB6 807 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 SDHAF3Q9NRP4 125 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TAS2R14Q9NYV8 317 aa11.72□□□□□ -0.53
NPHP4-202ENST00000378161 TMX2-CTNND1H3BSU7 103 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
NPHP4-202ENST00000378161 LDOC1O95751 146 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-202ENST00000378161 HEXBP07686 556 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 AXLP30530 894 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 RARRES1P49788 294 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 IDH3AP50213 366 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 PLA2G16P53816 162 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 GCNT1Q02742 428 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 SP140Q13342 867 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 USP41Q3LFD5 358 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 FNBP1LQ5T0N5 605 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 AFTPHQ6ULP2 937 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 DENND6AQ8IWF6 608 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 TAGAPQ8N103 731 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 WDSUB1Q8N9V3 476 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 URGCPQ8TCY9 931 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 ERAP1Q9NZ08 941 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 TRPS1Q9UHF7 1281 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 CASZ1Q86V15 1759 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 PLOD3O60568 738 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF780AO75290 641 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-202ENST00000378161 HK3P52790 923 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 KCNK10P57789 538 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF124Q15973 351 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 DCAF12L1Q5VU92 463 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 C4orf19Q8IY42 314 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
NPHP4-202ENST00000378161 NANPQ8TBE9 248 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 HEXDCQ8WVB3 486 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 TOP1MTQ969P6 601 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 DHX35Q9H5Z1 703 aaKnown RBP11.71□□□□□ -0.53
NPHP4-202ENST00000378161 PRDM8Q9NQV8 689 aa11.71□□□□□ -0.53
NPHP4-202ENST00000378161 MEIOCA2RUB1 952 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 HS6ST1O60243 411 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 RASGRP1O95267 797 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 DHFRP00374 187 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 PVALBP20472 110 aaPredicted RBP11.71□□□□□ -0.54
NPHP4-202ENST00000378161 STX4Q12846 297 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 SUPT20HL1Q3ZLR7 823 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 FAM131AQ6UXB0 335 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 ERMP1Q7Z2K6 904 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 CELF2-AS1Q8N7Q2 184 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 SLC2A14Q8TDB8 520 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 FEM1CQ96JP0 617 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 BCL7BQ9BQE9 202 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 SLC25A23Q9BV35 468 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 CPNE7Q9UBL6 633 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 REV1Q9UBZ9 1251 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 GPN3Q9UHW5 284 aaPredicted RBP11.71□□□□□ -0.54
NPHP4-202ENST00000378161 C3orf18Q9UK00 162 aa11.71□□□□□ -0.54
NPHP4-202ENST00000378161 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ICAM1P05362 532 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 NFICP08651 508 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 THRBP10828 461 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 COL6A1P12109 1028 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 TSHRP16473 764 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 NPR2P20594 1047 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CNTFP26441 200 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RPS7P62081 194 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 FASTKQ14296 549 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms