RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 OLA1Q9NTK5 396 aaKnown RBP17.07■□□□□ 0.32
TRIM27-201ENST00000377194 SLCO1B7G3V0H7 640 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 SDHDO14521 159 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 TBC1D4O60343 1298 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ALDH1A1P00352 501 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ATF6P18850 670 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 SLC6A4P31645 630 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 RAB39AQ14964 217 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 NEDD8Q15843 81 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 PARP15Q460N3 678 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 GPR158Q5T848 1215 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ANKRD26P1Q6NSI1 321 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 PRSS55Q6UWB4 352 aaPredicted RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 BLOC1S5Q8TDH9 187 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 TRPC4APQ8TEL6 797 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 MAELQ96JY0 434 aaKnown RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ANKRD60Q9BZ19 345 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 POLR1BQ9H9Y6 1135 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 GMPR2Q9P2T1 348 aaKnown RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 CDH7Q9ULB5 785 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 C1orf232A0A0U1RR37 186 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ADAM12O43184 909 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 NDUFB5O43674 189 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 PRAMEF11O60813 436 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 WISP3O95389 354 aaPredicted RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ZDHHC11BP0C7U3 371 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 TACR2P21452 398 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ADSLP30566 484 aaPredicted RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 ZC3H7AQ8IWR0 971 aaKnown RBP17.06■□□□□ 0.32
TRIM27-201ENST00000377194 OR13C4Q8NGS5 318 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
TRIM27-201ENST00000377194 SOBPA7XYQ1 873 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SULT1C4O75897 302 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 HDCP19113 662 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 RCVRNP35243 200 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 YAP1P46937 504 aaKnown RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SEMA3AQ14563 771 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 RGS21Q2M5E4 152 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 NHSL2Q5HYW2 709 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 GALNT18Q6P9A2 607 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 ZNF549Q6P9A3 640 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 CHSY3Q70JA7 882 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 LGI2Q8N0V4 545 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 BCL7CQ8WUZ0 217 aaPredicted RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 ALG9Q9H6U8 611 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 PDFQ9HBH1 243 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SMOXQ9NWM0 555 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SUCOQ9UBS9 1254 aaKnown RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 CNOT6Q9ULM6 557 aaKnown RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 MKI67P46013 3256 aaKnown RBP17.05■□□□□ 0.32
TRIM27-201ENST00000377194 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 TSPAN8P19075 237 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.321e-10■■■□□ 14.6
TRIM27-201ENST00000377194 RING1Q06587 406 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 ISCA2Q86U28 154 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 OFCC1Q8IZS5 231 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SCAIQ8N9R8 606 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SPPL2BQ8TCT7 592 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 SPATA17Q96L03 361 aa17.05■□□□□ 0.32
TRIM27-201ENST00000377194 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 CFAP99D6REC4 459 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 UBFD1O14562 309 aaKnown RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 GOT2P00505 430 aaKnown RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 PRSS56P0CW18 603 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 YBEYP58557 167 aaPredicted RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 ACAP2Q15057 778 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 LAYNQ6UX15 382 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 OR7D4Q8NG98 312 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 TAMM41Q96BW9 452 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 GID8Q9NWU2 228 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 VPS51Q9UID3 782 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 PRORSD1PA6NEY8 169 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 AKAP10O43572 662 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 SLC4A1P02730 911 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 SELPP16109 830 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 HOXD9P28356 352 aaPredicted RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 KPNA2P52292 529 aaKnown RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 BCL2A1Q16548 175 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 PPP1R3AQ16821 1122 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 PTERQ96BW5 349 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 CCDC162PA2VCL2 907 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 CNOT3O75175 753 aaKnown RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 BAIAP3O94812 1187 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 KCNH1O95259 989 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 GALTP07902 379 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 RPL17P18621 184 aaKnown RBP17.04■□□□□ 0.32
TRIM27-201ENST00000377194 GRIA3P42263 894 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 RGRP47804 291 aa17.04■□□□□ 0.32
TRIM27-201ENST00000377194 RPS24P62847 133 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms