RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C1RP00736 705 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 CES1P23141 567 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 RPL10P27635 214 aaKnown RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 MZF1P28698 734 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 RXRGP48443 463 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 GALNT1Q10472 559 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 OR4D1Q15615 310 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 TMEM150AQ86TG1 271 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 SLC15A3Q8IY34 581 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 PELI3Q8N2H9 469 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 CARNMT1Q8N4J0 409 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 AFAP1L2Q8N4X5 818 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 MEAF6Q9HAF1 191 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 PLK2Q9NYY3 685 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 WDR37Q9Y2I8 494 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 H0Y626 953 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 CDH13P55290 713 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 SMAD3P84022 425 aaKnown RBP13.89□□□□□ -0.19
MSH5-202ENST00000375740 HERC3Q15034 1050 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 SETMARQ53H47 684 aaPredicted RBP13.89□□□□□ -0.19
MSH5-202ENST00000375740 CLEC6AQ6EIG7 209 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 BORAQ6PGQ7 559 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 TICAM1Q8IUC6 712 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 ERI1Q8IV48 349 aaKnown RBP13.89□□□□□ -0.19
MSH5-202ENST00000375740 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 TMEM169Q96HH4 297 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 CDRT15Q96T59 188 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 PKP2Q99959 881 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 RIMS3Q9UJD0 308 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 RNF11Q9Y3C5 154 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 ANKRD36A6QL64 1941 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 ANKRD66B4E2M5 251 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 UBXN8O00124 270 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 NDUFS3O75489 264 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 LPOP22079 712 aaPredicted RBP13.89□□□□□ -0.19
MSH5-202ENST00000375740 APLP1P51693 650 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 HERVK_113P63132 956 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 TRAF2Q12933 501 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 PPP1R3AQ16821 1122 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 CNKSR3Q6P9H4 555 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 PAQR3Q6TCH7 311 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 CHSY3Q70JA7 882 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 PTGR2Q8N8N7 351 aaPredicted RBP13.89□□□□□ -0.19
MSH5-202ENST00000375740 LPGAT1Q92604 370 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 ERVK-6Q9BXR3 956 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 MED16Q9Y2X0 877 aa13.89□□□□□ -0.19
MSH5-202ENST00000375740 COL4A6Q14031 1691 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 A0A0U1RQS6 177 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 LRRC14BA6NHZ5 514 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 CFLARO15519 480 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 SERPINB7O75635 380 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 SRP72O76094 671 aaKnown RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 SIX3O95343 332 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 CCL5P13501 91 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 HOXD12P35452 270 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 NFKB2Q00653 900 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 MS4A2Q01362 244 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 CTBSQ01459 385 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 RAB33AQ14088 237 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 NRF1Q16656 503 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 TOP1MTQ969P6 601 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 NPAS2Q99743 824 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ADGRE3Q9BY15 652 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 Q9H521 79 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 EFCAB1Q9HAE3 211 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 BPIFA1Q9NP55 256 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 C6orf203Q9P0P8 240 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 PRPF19Q9UMS4 504 aaKnown RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 ENO3P13929 434 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 MTHFD2P13995 350 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ZNF24P17028 368 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 XRCC1P18887 633 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 PSMA3P25788 255 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 PPP3CCP48454 512 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 CDH15P55291 814 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 RELAQ04206 551 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ART3Q13508 389 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 TGFBIQ15582 683 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 NCEH1Q6PIU2 408 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 TTC16Q8NEE8 873 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 DDI1Q8WTU0 396 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms