RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SLC9A3R1O14745 358 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 RORAP35398 523 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MGAT5BQ3V5L5 792 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 HAVCR2Q8TDQ0 301 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 LRTM1Q9HBL6 345 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CCDC88AQ3V6T2 1871 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 PRORSD1PA6NEY8 169 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A9O60656 530 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A6P19224 532 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TYMPP19971 482 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A1P22309 533 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A4P22310 534 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A3P35503 534 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SNRPD1P62314 119 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SPIBQ01892 262 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CBLBQ13191 982 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A7Q9HAW7 530 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A10Q9HAW8 530 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UGT1A8Q9HAW9 530 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TRPC4Q9UBN4 977 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 LLGL2Q6P1M3 1020 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HID1Q8IV36 788 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SETD6Q8TBK2 473 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 RFT1Q96AA3 541 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 KCTD7Q96MP8 289 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PRICKLE1Q96MT3 831 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MYOZ2Q9NPC6 264 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 CLDN9O95484 217 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 CXCL8P10145 99 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 DNAJA1P31689 397 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ARL4DP49703 201 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TPTEP56180 551 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PHC1P78364 1004 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TXNL4AP83876 142 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 DAG1Q14118 895 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SLC1A5Q15758 541 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 REP15Q6BDI9 236 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ADNP2Q6IQ32 1131 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF517Q6ZMY9 492 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ERMP1Q7Z2K6 904 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 UFD1Q92890 307 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 POFUT2Q9Y2G5 429 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 EPHB6O15197 1021 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TGFB1I1O43294 461 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 GSTT2P0CG29 244 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SHMT1P34896 483 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 OR2B6P58173 313 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HERVK_113P63132 956 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 DDX39BQ13838 428 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ERVK-6Q9BXR3 956 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 POPDC3Q9HBV1 291 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SNX8Q9Y5X2 465 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 BCL9O00512 1426 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 E2F8A0AVK6 867 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 DLGAP1O14490 977 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 LRCH4O75427 683 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TIPRLO75663 272 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PET100P0DJ07 73 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 VSIG10LQ86VR7 867 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PCBD2Q9H0N5 130 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 NOCTQ9UK39 431 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SPEF1Q9Y4P9 236 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 AMPD1P23109 780 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HUNKP57058 714 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 IQCCQ4KMZ1 466 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PPP1R16BQ96T49 567 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MIOSQ9NXC5 875 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TNS2Q63HR2 1409 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 A0A0G2JPF8 293 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HNRNPCL3B7ZW38 293 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 CXCL11O14625 94 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HNRNPCL4P0DMR1 293 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HSD17B12Q53GQ0 312 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PDP1Q9P0J1 537 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PCDHB7Q9Y5E2 793 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PER2O15055 1255 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ESR1P03372 595 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF404Q494X3 552 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ARL13AQ5H913 290 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SLC7A5P2Q9GIP4 190 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TFB2MQ9H5Q4 396 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 DHRS7Q9Y394 339 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PRMT3O60678 531 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 RPP40O75818 363 aaKnown RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 ASGR1P07306 291 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SULT2A1Q06520 285 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MKRN4PQ13434 485 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-204ENST00000375290 PIK3R6Q5UE93 754 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 QSOX2Q6ZRP7 698 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SLC2A14Q8TDB8 520 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 TWIST2Q8WVJ9 160 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 HTRA1Q92743 480 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MAPKAP1Q9BPZ7 522 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 MGME1Q9BQP7 344 aa10.13□□□□□ -0.79
PTCH1-204ENST00000375290 SPATA31A1Q5TZJ5 1347 aa10.12□□□□□ -0.79
PTCH1-204ENST00000375290 LRG1P02750 347 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms