RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SGF29Q96ES7 293 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 MRPL46Q9H2W6 279 aaKnown RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 MRM3Q9HC36 420 aaKnown RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 ZNF711Q9Y462 761 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 AKAP10O43572 662 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 GNAO1P09471 354 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 ATXN1LP0C7T5 689 aaKnown RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 STMN1P16949 149 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 CDH4P55283 916 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 WDR5P61964 334 aaKnown RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 PTPRCAPQ14761 206 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 KIAA0930Q6ICG6 404 aaPredicted RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 TTC33Q6PID6 262 aaPredicted RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 LAYNQ6UX15 382 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 TMEM150AQ86TG1 271 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 LDB1Q86U70 411 aaPredicted RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 CEP295NLQ96MC4 621 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 PRKD2Q9BZL6 878 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 RC3H2Q9HBD1 1191 aaKnown RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 ARMC1Q9NVT9 282 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 SPG21Q9NZD8 308 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 CROTQ9UKG9 612 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 FBXO5Q9UKT4 447 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 FAM95CA0A1B0GW59 222 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 ZNF839A8K0R7 811 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 DNAJB13P59910 316 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 CBX3Q13185 183 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 RAB33AQ14088 237 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 PPP1R3AQ16821 1122 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 UGP2Q16851 508 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 ANKDD1AQ495B1 522 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 ADGRF1Q5T601 910 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 IRAK1BP1Q5VVH5 260 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 ZNF786Q8N393 782 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 OR6P1Q8NGX9 317 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 BLOC1S5Q8TDH9 187 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 GIPC3Q8TF64 312 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 TADA1Q96BN2 335 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 YME1L1Q96TA2 773 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 TCF12Q99081 682 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 MRPL57Q9BQC6 102 aaKnown RBP16.82■□□□□ 0.28
PHF1-202ENST00000374516 DCUN1D5Q9BTE7 237 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 MAGEH1Q9H213 219 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 POMKQ9H5K3 350 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 MEAF6Q9HAF1 191 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 HACD3Q9P035 362 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 CDC14AQ9UNH5 594 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 PDE4DIPQ5VU43 2346 aa16.82■□□□□ 0.28
PHF1-202ENST00000374516 CDH23Q9H251 3354 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 LOC285095A0A1B0GVY8 99 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 OR51F1A6NGY5 319 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CBX4O00257 560 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 DLGAP1O14490 977 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 MRASO14807 208 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 NRP2O60462 931 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 GPC4O75487 556 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 VARSP26640 1264 aaKnown RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 RGRP47804 291 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CD97P48960 835 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 POLD2P49005 469 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ARSDP51689 593 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 MTA1Q13330 715 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 EML3Q32P44 896 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 FAM45BPQ6NSW5 357 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 C8orf82Q6P1X6 216 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 ERMP1Q7Z2K6 904 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 MFSD2AQ8NA29 543 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 C2CD4AQ8NCU7 369 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 FAM45AQ8TCE6 357 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 BHMTQ93088 406 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ELMO2Q96JJ3 720 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 BLOC1S6Q9UL45 172 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CDH7Q9ULB5 785 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 MIA3Q5JRA6 1907 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 NEMP2A6NFY4 417 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 TEX28O15482 410 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 SUPT3HO75486 399 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 ATP5F1P24539 256 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 GRIA3P42263 894 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 OXCT1P55809 520 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 TNK2Q07912 1038 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ZNF177Q13360 481 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 SLC44A4Q53GD3 710 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 TXNDC8Q6A555 127 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CBR4Q8N4T8 237 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 OR2T34Q8NGX1 318 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 FAM110BQ8TC76 370 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 FAR2Q96K12 515 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 NSMCE3Q96MG7 304 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms