RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RAD51Q06609 339 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 GK3PQ14409 553 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NR6A1Q15406 480 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 Q6ZVU0 165 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 ISCA2Q86U28 154 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 UMODL1-AS1Q8N2C9 162 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RNF175Q8N4F7 328 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 TSPAN17Q96FV3 270 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 TSGA13Q96PP4 275 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 UPF3AQ9H1J1 476 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 AKTIPQ9H8T0 292 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 VPS51Q9UID3 782 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 MOSPD1Q9UJG1 213 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 VPS4AQ9UN37 437 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 USP22Q9UPT9 525 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NEU3Q9UQ49 428 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 WDR37Q9Y2I8 494 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 KANSL1LA0AUZ9 987 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 ANKRD66B4E2M5 251 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 PRAMEF11O60813 436 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RPP40O75818 363 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 CKMT2P17540 419 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 CD70P32970 193 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NEK2P51955 445 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 BCL2L1Q07817 233 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 IL10RBQ08334 325 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RIPK1Q13546 671 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 C6orf52Q5T4I8 152 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 OR6Y1Q8NGX8 325 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 HIC2Q96JB3 615 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF333Q96JL9 665 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 CIB1Q99828 191 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 MYOCQ99972 504 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 BBS2Q9BXC9 721 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 CLPBQ9H078 707 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 OLA1Q9NTK5 396 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 HCFC2Q9Y5Z7 792 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 WNT6Q9Y6F9 365 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RGPD3A6NKT7 1758 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RGPD4Q7Z3J3 1758 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 KLF11O14901 512 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 SLC25A14O95258 325 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 CLIC3O95833 236 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 C8AP07357 584 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 MYOGP15173 224 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 LPOP22079 712 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 GSTT1P30711 240 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 KPNA2P52292 529 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 DGKQP52824 942 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NDST2P52849 883 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 YBX1P67809 324 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 SF1Q15637 639 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 SFT2D3Q587I9 215 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 MTX3Q5HYI7 312 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 KIAA0930Q6ICG6 404 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 TMC5Q6UXY8 1006 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 ANKRD46Q86W74 232 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 GPSM1Q86YR5 675 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 ADGRG2Q8IZP9 1017 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 FIBCD1Q8N539 461 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 BRSK1Q8TDC3 778 aa10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NSUN3Q9H649 340 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 NOL11Q9H8H0 719 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 EML4Q9HC35 981 aaKnown RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 RABL2AQ9UBK7 228 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 PNMA8BQ9ULN7 279 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-203ENST00000374429 REV3LO60673 3130 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 RNF103-CHMP3A0A140T963 221 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 NRG2O14511 850 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 VPS26AO75436 327 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ECI2O75521 394 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 RBP1P09455 135 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ATXN1LP0C7T5 689 aaKnown RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 HOXD9P28356 352 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ADRA1AP35348 466 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 CEACAM7Q14002 265 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 KRT72Q14CN4 511 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 GRAMD4Q6IC98 578 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ANO7Q6IWH7 933 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 SPPL2CQ8IUH8 684 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 KDM1BQ8NB78 822 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF184Q99676 751 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 C1QTNF1Q9BXJ1 281 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ADGRE3Q9BY15 652 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 FAM124BQ9H5Z6 455 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 SLAMF8Q9P0V8 285 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 GRXCR1A8MXD5 290 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 PDLIM1O00151 329 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 SYNCRIPO60506 623 aaKnown RBP10.73□□□□□ -0.69
CXCL12-203ENST00000374429 PEX11BO96011 259 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 IGLV3-25P01717 112 aa10.73□□□□□ -0.69
CXCL12-203ENST00000374429 ITPKAP23677 461 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms