RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MACC1Q6ZN28 852 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 BNC2Q6ZN30 1099 aaPredicted RBP8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 LRRC74BQ6ZQY2 392 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 TPRG1Q6ZUI0 275 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 NEK10Q6ZWH5 1172 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 LARP4Q71RC2 724 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■■■■ 32.5
SNRNP40-202ENST00000373720 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 KDELC2Q7Z4H8 507 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 AADATQ8N5Z0 425 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 KREMEN2Q8NCW0 462 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 LPCAT1Q8NF37 534 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 MDGA1Q8NFP4 955 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 WFIKKN2Q8TEU8 576 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 PIH1D2Q8WWB5 315 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 ECHDC3Q96DC8 303 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 ASB9Q96DX5 294 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 C19orf60Q96EN9 201 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 MYO19Q96H55 970 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 METTL2AQ96IZ6 378 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 BTBD9Q96Q07 612 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 LRRC3Q9BY71 257 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 NUF2Q9BZD4 464 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 TRIM15Q9C019 465 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 P2RY12Q9H244 342 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 Q9H521 79 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 GKN1Q9NS71 199 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 GTSE1Q9NYZ3 720 aa8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 SUCOQ9UBS9 1254 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-202ENST00000373720 C2orf78A6NCI8 922 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 E9PBE3 544 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 C5orf67F2Z3F1 127 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 SDHDO14521 159 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 KLHL41O60662 606 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 WDR47O94967 919 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CXCL14O95715 111 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CD160O95971 181 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 OTCP00480 354 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 C8AP07357 584 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CHRNGP07510 517 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 RPS17P08708 135 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CYP2A6P11509 494 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ANPEPP15144 967 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ACPPP15309 386 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 LBPP18428 481 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 RPL17P18621 184 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ITGAXP20702 1163 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MPSTP25325 297 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 EPHA3P29320 983 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ARRB2P32121 409 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 SPAM1P38567 509 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 RECQLP46063 649 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 HNMTP50135 292 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 DCDC1P59894 354 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CLCQ05315 142 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CUL3Q13618 768 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 KCNC3Q14003 757 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 PTK2BQ14289 1009 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 GALNT3Q14435 633 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 RCN1Q15293 331 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 TAF11Q15544 211 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 PTPRNQ16849 979 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 TCTN1Q2MV58 587 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 AASDHQ4L235 1098 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 PPM1LQ5SGD2 360 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 KANK2Q63ZY3 851 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 NXNQ6DKJ4 435 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 SULT1C3Q6IMI6 304 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 IRGCQ6NXR0 463 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF549Q6P9A3 640 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 TLDC1Q6P9B6 456 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CIR1Q86X95 450 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 GPSM1Q86YR5 675 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 TMC8Q8IU68 726 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 DEFB107AQ8IZN7 70 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MYO1HQ8N1T3 1032 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MIER2Q8N344 545 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MINDY1Q8N5J2 469 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MRPL43Q8N983 215 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ACVR1CQ8NER5 493 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 OR13C4Q8NGS5 318 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 BIRC8Q96P09 236 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 OR52B2Q96RD2 323 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MCCC1Q96RQ3 725 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF184Q99676 751 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 FAM126AQ9BYI3 521 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 TRIM54Q9BYV2 358 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ALG9Q9H6U8 611 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 ZNF395Q9H8N7 513 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 S100A14Q9HCY8 104 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 SMOXQ9NWM0 555 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 POLG2Q9UHN1 485 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 MAPRE3Q9UPY8 281 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 POMPQ9Y244 141 aa8.65□□□□□ -1.02
SNRNP40-202ENST00000373720 CRYL1Q9Y2S2 319 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms