RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GAD1Q99259 594 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 NXF3Q9H4D5 531 aaKnown RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 RNF19AQ9NV58 838 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 CDH22Q9UJ99 828 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 M0R036 132 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PDHXO00330 501 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 CCNDBP1O95273 360 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ELFN1P0C7U0 828 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ATP6V0D1P61421 351 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 SCN1BQ07699 218 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 POMZP3Q6PJE2 187 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 SETD6Q8TBK2 473 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 NKD1Q969G9 470 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 MCMBPQ9BTE3 642 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 GULP1Q9UBP9 304 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PRAMEF33A0A0G2JMD5 474 aa12.4□□□□□ -0.43
HCFC1-202ENST00000369984 MID1O15344 667 aa12.4□□□□□ -0.43
HCFC1-202ENST00000369984 MAFKO60675 156 aa12.4□□□□□ -0.43
HCFC1-202ENST00000369984 PRAMEF10O60809 474 aa12.4□□□□□ -0.43
HCFC1-202ENST00000369984 AP2M1Q96CW1 435 aa12.4□□□□□ -0.43
HCFC1-202ENST00000369984 A8MUI8 341 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 FABP3P05413 133 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 EPHX2P34913 555 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 PSEN2P49810 448 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MECP2P51608 486 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 PLA2G4EQ3MJ16 856 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 POF1BQ8WVV4 589 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ASF1AQ9Y294 204 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 C9IYK1 514 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 SCAMP3O14828 347 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 GJA9P57773 515 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ITPK1Q13572 414 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MAP4K3Q8IVH8 894 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 RFKQ969G6 155 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 EXOC2Q96KP1 924 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 PPM1MQ96MI6 270 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ASAH2Q9NR71 780 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 HOXC6P09630 235 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CDH4P55283 916 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 EGFLAMQ63HQ2 1017 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 FAM92BQ6ZTR7 304 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CHST15Q7LFX5 561 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 DNAJA4Q8WW22 397 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 DNASE1L2Q92874 299 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 LGMNQ99538 433 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 PSMD9O00233 223 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 RPS2P15880 293 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CRHR1P34998 444 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 FRMD7Q6ZUT3 714 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 GMIPQ9P107 970 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 TRIM64BA6NI03 449 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 BTNL10A8MVZ5 291 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 GSC2O15499 205 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 TRMUO75648 421 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 TGFB2P61812 414 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 SERPINA13PQ6UXR4 307 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 UBE2R2Q712K3 238 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CUZD1Q86UP6 607 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MREGQ8N565 214 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ACP6Q9NPH0 428 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 SRRM3A6NNA2 597 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 DBIP07108 87 aaKnown RBP12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MAN2A2P49641 1150 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 AHSA2Q719I0 299 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ADGRA1Q86SQ6 560 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 SNX33Q8WV41 574 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CEP295NLQ96MC4 621 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ADAM2Q99965 735 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 CORO1BQ9BR76 489 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
HCFC1-202ENST00000369984 ANKRD63C9JTQ0 380 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PGRP06401 933 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 NUDT17P0C025 328 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 KCNA5P22460 613 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 NAT14Q8WUY8 206 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PLLPQ9Y342 182 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TISP43B9A030 160 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 DNTTP04053 509 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SF1Q15637 639 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms