RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 NSG1P42857 185 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 DBN1Q16643 649 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 LDLRAP1Q5SW96 308 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 CCDC91Q7Z6B0 441 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ARFGAP2Q8N6H7 521 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 OR2T34Q8NGX1 318 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ASB12Q8WXK4 309 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ELMO2Q96JJ3 720 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 C1QTNF2Q9BXJ5 285 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 CLPBQ9H078 707 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 OGFRQ9NZT2 677 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 SMG5Q9UPR3 1016 aaKnown RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 PLXNA2O75051 1894 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 A0A1W2PPM1 405 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 CFAP99D6REC4 459 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 H3BMM5 538 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 TPP1O14773 563 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 DCXO43602 365 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.45
TUBE1-202ENST00000368662 RFPL1O75677 317 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 MPOP05164 745 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 RALBP11234 206 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 BRAFP15056 766 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 NR1D1P20393 614 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 CRABP2P29373 138 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 MAGEA12P43365 314 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 ABCG1P45844 678 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 GPR1P46091 355 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 BTN2A2Q8WVV5 523 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 GLYATL1Q969I3 302 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 SERAC1Q96JX3 654 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 SNX15Q9NRS6 342 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 GNPTGQ9UJJ9 305 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 VWA7Q9Y334 891 aa12.21□□□□□ -0.45
TUBE1-202ENST00000368662 IGLV3-16A0A075B6K0 115 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 A0A1W2PQU0 124 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 F8W8V4 182 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 GPR39O43194 453 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 F7P08709 466 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 PKMP14618 531 aaKnown RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CD9P21926 228 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 TEAD1P28347 426 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 HPDP32754 393 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CCR3P51677 355 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 RAB10P61026 200 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 SLC18A2Q05940 514 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 MTAPQ13126 283 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 LRRC14Q15048 493 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 TAF1BQ53T94 588 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 HECTD2Q5U5R9 776 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 SEL1L3Q68CR1 1132 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 FAM124AQ86V42 546 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 FAM76AQ8TAV0 307 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 BIRC8Q96P09 236 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 UHRF1Q96T88 793 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 AARSD1Q9BTE6 412 aaKnown RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 SLC17A9Q9BYT1 436 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 P2RY12Q9H244 342 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 POPDC3Q9HBV1 291 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 EBF1Q9UH73 591 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 TLK1Q9UKI8 766 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 ZFR2Q9UPR6 939 aaKnown RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 FADS2P1A8MWK0 482 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 QSOX1O00391 747 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 OR1I1O60431 355 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 PYGBP11216 843 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 FMO4P31512 558 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 ACSL1P33121 698 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CCNFP41002 786 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CXCL12P48061 93 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CCT5P48643 541 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 PPP2R2AP63151 447 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 SH2D5Q6ZV89 423 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 RAPH1Q70E73 1250 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 LCA5Q86VQ0 697 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 C4orf33Q8N1A6 199 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 KCNJ9Q92806 393 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 NECAB3Q96P71 396 aaPredicted RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 ZCCHC2Q9C0B9 1178 aaKnown RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
TUBE1-202ENST00000368662 C2orf42Q9NWW7 574 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms