RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 PTGIRP43119 386 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 SIM1P81133 766 aaPredicted RBP14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 XIAPP98170 497 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 DNAJC3Q13217 504 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 PDPK2PQ6A1A2 396 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 GRK7Q8WTQ7 553 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 UBXN4Q92575 508 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 SCARF2Q96GP6 870 aaPredicted RBP14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 VPS35Q96QK1 796 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 TOR4AQ9NXH8 423 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 NLGN3Q9NZ94 848 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 ATXN10Q9UBB4 475 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 PRKAB1Q9Y478 270 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZFC3H1O60293 1989 aaKnown RBP14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 NEMP2A6NFY4 417 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 LMO7DNF2Z398 122 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 YY2O15391 372 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PPFIA2O75334 1257 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 TMEM63AO94886 807 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PRAMEF1O95521 474 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 LDOC1O95751 146 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 TPSB2P20231 275 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PAFAH1B1P43034 410 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PEX6Q13608 980 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ELOCQ15369 112 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 TPSAB1Q15661 275 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PROX2Q3B8N5 592 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZDHHC20Q5W0Z9 365 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ADGRG6Q86SQ4 1221 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 GLRX5Q86SX6 157 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PHYKPLQ8IUZ5 450 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 FSTL5Q8N475 847 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 CPT1BQ92523 772 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 CDC6Q99741 560 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 OR2AG1Q9H205 316 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PCYOX1Q9UHG3 505 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 LY6G6EA0A0G2JKS1 128 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 MROH6A6NGR9 719 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 GAS8O95995 478 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZNF8P17098 575 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 AK4P27144 223 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ADCY8P40145 1251 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 MAGEA6P43360 314 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 SESN2P58004 480 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 CRADDP78560 199 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PDE1BQ01064 536 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 PYCR3Q53H96 274 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 N4BP2L1Q5TBK1 243 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLCO6A1Q86UG4 719 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 NRROSQ86YC3 692 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 SFTPA2Q8IWL1 248 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 NOA1Q8NC60 698 aaKnown RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 DTX3LQ8TDB6 740 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZNF778Q96MU6 729 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 NLE1Q9NVX2 485 aaPredicted RBP14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 VPS18Q9P253 973 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 U3KQA8 63 aa14.93□□□□□ -0.02
SMPDL3A-201ENST00000368440 SRP72O76094 671 aaKnown RBP14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 ANXA6P08133 673 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 FTH1P19P0C7X4 201 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 PRSS56P0CW18 603 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 ALPPL2P10696 532 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 ARSDP51689 593 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 PPP1R7Q15435 360 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 PNPLA1Q8N8W4 532 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZNF398Q8TD17 642 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLCO2A1Q92959 643 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 OR2M4Q96R27 311 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 FAM96AQ9H5X1 160 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 TRIM39Q9HCM9 518 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 RNF14Q9UBS8 474 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLC2A6Q9UGQ3 507 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 GPSM3Q9Y4H4 160 aa14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
SMPDL3A-201ENST00000368440 TPP1O14773 563 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TNFSF14O43557 240 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 NUAK1O60285 661 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 MC4RP32245 332 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CDKN1CP49918 316 aaPredicted RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CTBSQ01459 385 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 ITGA9Q13797 1035 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 PTK6Q13882 451 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 C6orf132Q5T0Z8 1188 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GPRC6AQ5T6X5 926 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TAF8Q7Z7C8 310 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GALNT13Q8IUC8 556 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GDAP1Q8TB36 358 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GPBAR1Q8TDU6 330 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 STYXQ8WUJ0 223 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 RANBP9Q96S59 729 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 BOCQ9BWV1 1114 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 ASB8Q9H765 288 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TRNAU1APQ9NX07 287 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 SIRPGQ9P1W8 387 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms