RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR2T3Q8NH03 318 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 PNPT1Q8TCS8 783 aaKnown RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CLEC4CQ8WTT0 213 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 LRRN4Q8WUT4 740 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TFAP2CQ92754 450 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 ATP6V1E2Q96A05 226 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 MFSD3Q96ES6 412 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 PLEKHG4BQ96PX9 1271 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 RANBP9Q96S59 729 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 HOPXQ9BPY8 73 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 TUBA1CQ9BQE3 449 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CHRDQ9H2X0 955 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TRPV4Q9HBA0 871 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 ZFP14Q9HCL3 533 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CCM2LQ9NUG4 571 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 OLAHQ9NV23 265 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 DUS2Q9NX74 493 aaKnown RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 SEPT10Q9P0V9 454 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 XPR1Q9UBH6 696 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 ABCD2Q9UBJ2 740 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 MRPS17Q9Y2R5 130 aaKnown RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 NUP210Q8TEM1 1887 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 FAM95CA0A1B0GW59 222 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 M0QYT0 321 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 MAN2B1O00754 1011 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 NRP2O60462 931 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ANXA9O76027 345 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 HSD17B1P14061 328 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TGM1P22735 817 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 NMBRP28336 390 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 PCSK6P29122 969 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ADORA2BP29275 332 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 LRPAP1P30533 357 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 GNL1P36915 607 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 MTAPQ13126 283 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 FASTKQ14296 549 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 DLG2Q15700 870 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TECRLQ5HYJ1 363 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TSTD2Q5T7W7 516 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ACBD5Q5T8D3 534 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 LCN8Q6JVE9 175 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ZNF280DQ6N043 979 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TSSK4Q6SA08 328 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 CES3Q6UWW8 571 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 GPR141Q7Z602 305 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 SCML4Q8N228 414 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 LEMD2Q8NC56 503 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 C2CD4AQ8NCU7 369 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 KCTD4Q8WVF5 259 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 LPGAT1Q92604 370 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 SMARCD2Q92925 531 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 USP13Q92995 863 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 FEM1CQ96JP0 617 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 DNAJC1Q96KC8 554 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 FCRL5Q96RD9 977 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 NPAS2Q99743 824 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TMEM79Q9BSE2 394 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 C9orf16Q9BUW7 83 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 LRRC3Q9BY71 257 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 FAM126AQ9BYI3 521 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 BRD9Q9H8M2 597 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 CAB39LQ9H9S4 337 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 DDX18Q9NVP1 670 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 ADA2Q9NZK5 511 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 TUBGCP4Q9UGJ1 667 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 CNOT6Q9ULM6 557 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 KIF26AQ9ULI4 1882 aaPredicted RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 MYO18AQ92614 2054 aaKnown RBP11.48□□□□□ -0.57
USF1-201ENST00000368019 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
USF1-201ENST00000368019 E7ENX8 843 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 PSMD12O00232 456 aaPredicted RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 ARNTLO00327 626 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 MRASO14807 208 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 UBDO15205 165 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 GPIP06744 558 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 ZNF12P17014 697 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 NFKB1P19838 968 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CCNCP24863 283 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 VIPR2P41587 438 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CD151P48509 253 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 CD97P48960 835 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 TAF6P49848 677 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 GEMP55040 296 aa11.47□□□□□ -0.57
USF1-201ENST00000368019 MLLT6P55198 1093 aaPredicted RBP11.47□□□□□ -0.57
USF1-201ENST00000368019 ATP6V0D1P61421 351 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms