RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 BPGMP07738 259 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 TFPIP10646 304 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 AMD1P17707 334 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 FSHRP23945 695 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 SPIBQ01892 262 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 PKP2Q99959 881 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 EML1O00423 815 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 TSPAN8P19075 237 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 ALLCQ8N6M5 410 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 SETD6Q8TBK2 473 aa11.02□□□□□ -0.65
CDC42BPA-205ENST00000366769 NDUFB10O96000 172 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 AP5B1Q2VPB7 878 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 DET1Q7L5Y6 550 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ETNPPLQ8TBG4 499 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 TMEM159Q96B96 161 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ENOPH1Q9UHY7 261 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 SCN2BO60939 215 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 VPS4BO75351 444 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 RPLP0P05388 317 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ALDH3A2P51648 485 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 SNAPC2Q13487 334 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 TOR1AIP1Q5JTV8 583 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ANKFN1Q8N957 763 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PPM1MQ96MI6 270 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 UBQLN1Q9UMX0 589 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PLLPQ9Y342 182 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 AKT2P31751 481 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 RPL9P32969 192 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ERVK-25P63136 954 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 NAB1Q13506 487 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF655Q8N720 491 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PADI2Q9Y2J8 665 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 MTA2O94776 668 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CD36P16671 472 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 NTSP30990 170 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CCDC58Q4VC31 144 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CPNE2Q96FN4 548 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 IL1RAPQ9NPH3 570 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 C3orf18Q9UK00 162 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PCDHA3Q9Y5H8 950 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CEP290O15078 2479 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ARL5CA6NH57 179 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRDX5P30044 214 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ARSKQ6UWY0 536 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 RP9Q8TA86 221 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 LPIN3Q9BQK8 851 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 SMIM30A4D0T7 59 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 GSG1L2A8MUP6 293 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 TTC34A8MYJ7 566 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 IPO13O94829 963 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CHST15Q7LFX5 561 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 TARS2Q9BW92 718 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 GFOD1Q9NXC2 390 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 DGAT1O75907 488 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 VNN2O95498 520 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 MAGEA6P43360 314 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 GFOD2Q3B7J2 385 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 CFAP77Q6ZQR2 320 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 UBR7Q8N806 425 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ARAP3Q8WWN8 1544 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ANKDD1BA6NHY2 528 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 DISC1C4P0D8 188 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 MID1O15344 667 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 UGT2B11O75310 529 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 PROSCO94903 275 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 IFNA6P05013 189 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 URODP06132 367 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 RBP1P09455 135 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 SCARF1Q14162 830 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF549Q6P9A3 640 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 ASB18Q6ZVZ8 466 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 RNF180Q86T96 592 aa11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 TSNAXQ99598 290 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 MKRN2Q9H000 416 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-205ENST00000366769 UNC13BO14795 1591 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 MEN1O00255 615 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ULK1O75385 1050 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 TSPAN5P62079 268 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 GRB10Q13322 594 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 TUBB3Q13509 450 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SIM2Q14190 667 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SCIMPQ6UWF3 145 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 LNX2Q8N448 690 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 TMEM168Q9H0V1 697 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF208O43345 1280 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 DNAJA2O60884 412 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 STOMP27105 288 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CRATP43155 626 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms