RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PTPRBP23467 1997 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 DMXL2Q8TDJ6 3036 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 MEI4A8MW99 385 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TAF4O00268 1085 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 PROM1O43490 865 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ASS1P00966 412 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 KLKB1P03952 638 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 RPN1P04843 607 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 GNSP15586 552 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 CD6P30203 668 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 RDXP35241 583 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 GCLMP48507 274 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 VAMP7P51809 220 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 HK3P52790 923 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 MFAP3P55082 362 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 GRIK2Q13002 908 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 PKP1Q13835 747 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 STARD3Q14849 445 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF169Q14929 603 aaPredicted RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TRIP6Q15654 476 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 FUT11Q495W5 492 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 C1orf220Q5T0J3 134 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 SYCP2LQ5T4T6 812 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 MICALCLQ6ZW33 695 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 RABEPKQ7Z6M1 372 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 SCD5Q86SK9 330 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 UNC93AQ86WB7 457 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 NAXDQ8IW45 347 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ADGRG5Q8IZF4 528 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 PRR18Q8N4B5 295 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZCCHC9Q8N567 271 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TAS1R2Q8TE23 839 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 SORCS1Q8WY21 1168 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TAF4BQ92750 862 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 MTFMTQ96DP5 389 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 PAGE5Q96GU1 130 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TRIB1Q96RU8 372 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 HNRNPABQ99729 332 aaKnown RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 FAM124BQ9H5Z6 455 aaPredicted RBP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 SYNPO2LQ9H987 977 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 PRDM16Q9HAZ2 1276 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 IL21RQ9HBE5 538 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 GPR35Q9HC97 309 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 LMBRD1Q9NUN5 540 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 TLK1Q9UKI8 766 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 ANKRD6Q9Y2G4 727 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 FRMD4BQ9Y2L6 1034 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 CKAP5Q14008 2032 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 CHD6Q8TD26 2715 aa5.38□□□□□ -1.55
RNU4-4P-201ENST00000364588 CACNA1GO43497 2377 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 TP53BP1Q12888 1972 aaPredicted RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 A0A1B0GVL5 298 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 CCDC151A5D8V7 595 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 LRRC14BA6NHZ5 514 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 KCNJ18B7U540 433 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 H0Y626 953 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 PDXKO00764 312 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 IKBKBO14920 756 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 CALUO43852 315 aaPredicted RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 SYNCRIPO60506 623 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 GJB3O75712 270 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 SUN1O94901 812 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 TRIM16O95361 564 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 RALAP11233 206 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 HLA-EP13747 358 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 PFKFB1P16118 471 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 TRIM21P19474 475 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 NR2F2P24468 414 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 PRKCHP24723 683 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 CORO1AP31146 461 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 TPMTP51580 245 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF135P52742 658 aaPredicted RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 INCA1Q0VD86 236 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 PIN1Q13526 163 aaPredicted RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF234Q14588 700 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 NUMA1Q14980 2115 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 WDR45BQ5MNZ6 344 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 DCAF12L1Q5VU92 463 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 C19orf48Q6RUI8 117 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 RSRC2Q7L4I2 434 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 CCDC186Q7Z3E2 898 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 FAM90A1Q86YD7 464 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 DENND1CQ8IV53 801 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 BRIX1Q8TDN6 353 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 SETD7Q8WTS6 366 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 UCMAQ8WVF2 138 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 NDRG1Q92597 394 aaKnown RBP5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 MVB12AQ96EY5 273 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 SIPA1Q96FS4 1042 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 EEF2KMTQ96G04 330 aa5.37□□□□□ -1.55
RNU4-4P-201ENST00000364588 DUSP16Q9BY84 665 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms