RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 FAM90A26D6RGX4 464 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 DAB1O75553 588 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SELLP14151 372 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 UGT1A1P22309 533 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 HOXA13P31271 388 aaPredicted RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMPOP42166 694 aaKnown RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 MSH2P43246 934 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SUOXP51687 545 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SNX16P57768 344 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 ISL1P61371 349 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SPOCK1Q08629 439 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 CHAF1BQ13112 559 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SNTA1Q13424 505 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 TNFAIP1Q13829 316 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 PDE1CQ14123 709 aaPredicted RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 KEAP1Q14145 624 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 DLG2Q15700 870 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 PLEKHS1Q5SXH7 462 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 ATG9AQ7Z3C6 839 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 ZNF441Q8N8Z8 693 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 C1orf131Q8NDD1 294 aaKnown RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 MAGEC3Q8TD91 643 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SLC44A1Q8WWI5 657 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 SAT2Q96F10 170 aaPredicted RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMEM19Q96HH6 336 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 MXD3Q9BW11 206 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 MAK16Q9BXY0 300 aaKnown RBP4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 CCDC68Q9H2F9 335 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 MAGIXQ9H6Y5 334 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 CD93Q9NPY3 652 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 NSMCE4AQ9NXX6 385 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 FBXL2Q9UKC9 423 aa4.21□□□□□ -1.74
RNU6-560P-201ENST00000364007 TCF20Q9UGU0 1960 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 A0A1W2PR77 199 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 KANSL1LA0AUZ9 987 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 OR2A25A4D2G3 310 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 EIF4E1BA6NMX2 242 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 CDRT15L2A8MXV6 281 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 HNRNPCL2B2RXH8 293 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 B4DLN1 442 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 K7ENM7 598 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 ANKRD28O15084 1053 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 SMAD9O15198 467 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 KCNN4O15554 427 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 MYOD1P15172 320 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 FASLGP48023 281 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 GPR143P51810 404 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 MRPL12P52815 198 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 ART1P52961 327 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 MFAP4P55083 255 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 MRPS5P82675 430 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 PPP2R2BQ00005 443 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 ECT2LQ008S8 904 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 EEF1A2Q05639 463 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 TOMM20Q15388 145 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 CCDC96Q2M329 555 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 RARS2Q5T160 578 aaKnown RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 C9orf57Q5W0N0 161 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 CCDC190Q86UF4 302 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 AACSQ86V21 672 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMEM219Q86XT9 240 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 HACE1Q8IYU2 909 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 SCYL3Q8IZE3 742 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 C1orf87Q8N0U7 546 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 TAGAPQ8N103 731 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 GSDMBQ8TAX9 411 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 TRPC4APQ8TEL6 797 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 BICD1Q96G01 975 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 SEMA3CQ99985 751 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 C1QTNF4Q9BXJ3 329 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 CSTL1Q9H114 145 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 C6orf106Q9H6K1 298 aaPredicted RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 TMEM30AQ9NV96 361 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 UBA2Q9UBT2 640 aaPredicted RBP4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 PADI1Q9ULC6 663 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 B3GALT5Q9Y2C3 310 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 PRAG1Q86YV5 1406 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 PTPRCP08575 1304 aa4.2□□□□□ -1.74
RNU6-560P-201ENST00000364007 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 MAGEA13PA6NCF6 341 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 PROB1E7EW31 1015 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 CTDSP2O14595 271 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 HS3ST1O14792 307 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 TSPAN9O75954 239 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 CAMTA2O94983 1202 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 HLA-DOBP13765 273 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 MMP9P14780 707 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 DAOP14920 347 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 ITGA2P17301 1181 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 HRH2P25021 359 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 TKTP29401 623 aaKnown RBP4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 SLC15A1P46059 708 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 MMP14P50281 582 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 COG7P83436 770 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 LRMPQ12912 555 aa4.19□□□□□ -1.74
RNU6-560P-201ENST00000364007 EPS8Q12929 822 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms