RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RDH11Q8TC12 318 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 MAPK15Q8TD08 544 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 PTCHD1Q96NR3 888 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 FCRL5Q96RD9 977 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 IL12RB2Q99665 862 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 GATA5Q9BWX5 397 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-202ENST00000360642 RHOJQ9H4E5 214 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 AGO3Q9H9G7 860 aaKnown RBP7.34□□□□□ -1.23
CLCN3-202ENST00000360642 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
CLCN3-202ENST00000360642 DUSP11O75319 330 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 FKBP6O75344 327 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CELF2O95319 508 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 AHSGP02765 367 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 APOA4P06727 396 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SLC35E2BP0CK96 405 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ODC1P11926 461 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 AGXTP21549 392 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PAX7P23759 505 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ADRA1AP35348 466 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 RGS2P41220 211 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ARCN1P48444 511 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 AP2B1P63010 937 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 NKPD1Q17RQ9 610 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PGS1Q32NB8 556 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PCID2Q5JVF3 399 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TMEM240Q5SV17 173 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CAPRIN2Q6IMN6 1127 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 RTN4RL1Q86UN2 441 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SERINC5Q86VE9 423 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TRPV1Q8NER1 839 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SPATA22Q8NHS9 363 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 STON2Q8WXE9 905 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SGCZQ96LD1 299 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ZNF184Q99676 751 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 DRC3Q9H069 523 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 DMAP1Q9NPF5 467 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SHROOM3Q8TF72 1996 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SCN10AQ9Y5Y9 1956 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 BPTFQ12830 3046 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PATJQ8NI35 1801 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 DPPA5A6NC42 116 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PRSS47A8MTI9 375 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 GOLGA8TH3BQL2 631 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MATN2O00339 956 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 FGF10O15520 208 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 IRAK2O43187 625 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 BUD23O43709 281 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 HSPA4LO95757 839 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PDHA1P08559 390 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 LINGO3P0C6S8 592 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SRGAP2BP0DMP2 458 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 AKR1A1P14550 325 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ITGAXP20702 1163 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CRABP2P29373 138 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 HTR7P34969 479 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 POLD2P49005 469 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PRKAA2P54646 552 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 BRMS1LQ5PSV4 323 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 AFMIDQ63HM1 303 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ANKRD34AQ69YU3 496 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 FRMD7Q6ZUT3 714 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 OXR1Q8N573 874 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TDRD5Q8NAT2 981 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PPFIBP2Q8ND30 876 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 OR10T2Q8NGX3 314 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SCAMP5Q8TAC9 235 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 GPR78Q96P69 363 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TBL1YQ9BQ87 522 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MTG1Q9BT17 334 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TRIM62Q9BVG3 475 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ACE2Q9BYF1 805 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 S100A14Q9HCY8 104 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CDH22Q9UJ99 828 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SLC39A10Q9ULF5 831 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SPEF1Q9Y4P9 236 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 PTPRDP23468 1912 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MATN3O15232 486 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 DCXO43602 365 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MGEA5O60502 916 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CABYRO75952 493 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MT-CYBP00156 380 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CELA3BP08861 270 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 HK2P52789 917 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 LGALS4P56470 323 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 KLF10Q13118 480 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 FSCBQ5H9T9 825 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 LIPMQ5VYY2 423 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 RNF111Q6ZNA4 994 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 EP400NLQ6ZTU2 488 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 BEND4Q6ZU67 534 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 NLRC5Q86WI3 1866 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SLC41A1Q8IVJ1 513 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MFSD6LQ8IWD5 586 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CENPLQ8N0S6 344 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 STYXQ8WUJ0 223 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 UCMAQ8WVF2 138 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 GATA6Q92908 595 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms