RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-203ENST00000359895 C1orf232A0A0U1RR37 186 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 NPEPPSL1A6NEC2 478 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 CDC7O00311 574 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 NVLO15381 856 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 SIX3O95343 332 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 RPS17P08708 135 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 ANPEPP15144 967 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 PTPN2P17706 415 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 EEF1DP29692 281 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 CDH13P55290 713 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 SH3BP2P78314 561 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 CDC16Q13042 620 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 LCP2Q13094 533 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 ART3Q13508 389 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 PTPRRQ15256 657 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 UGT3A2Q3SY77 523 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 KANK2Q63ZY3 851 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 CLEC6AQ6EIG7 209 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 BNC2Q6ZN30 1099 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 LARP4Q71RC2 724 aaKnown RBP eCLIP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 EFL1Q7Z2Z2 1120 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 ADGRG6Q86SQ4 1221 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 RBFAQ8N0V3 343 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 OR6K2Q8NGY2 324 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 GIMAP7Q8NHV1 300 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 DTX3LQ8TDB6 740 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 SP7Q8TDD2 431 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 SLC22A17Q8WUG5 538 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 EID2BQ96D98 161 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 LINGO1Q96FE5 620 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 MARK4Q96L34 752 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 LYSMD1Q96S90 227 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 CLPBQ9H078 707 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 UTP6Q9NYH9 597 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 GALPQ9UBC7 116 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 BCAP29Q9UHQ4 241 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 SLC25A13Q9UJS0 675 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 POMPQ9Y244 141 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 HS3ST2Q9Y278 367 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 DHRS7Q9Y394 339 aa18.15■□□□□ 0.5
PDLIM7-203ENST00000359895 GRM6O15303 877 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 VPS4BO75351 444 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 ZNF821O75541 412 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 PDE5AO76074 875 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 PRAMEF12O95522 483 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 TSPAN12O95859 305 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 SRCP12931 536 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 ERVFC1P60507 584 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 CLCQ05315 142 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 GEN1Q17RS7 908 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 MUM1Q2TAK8 710 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 GRAMD4Q6IC98 578 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 GPSM1Q86YR5 675 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 CMTM8Q8IZV2 173 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 MRPL43Q8N983 215 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 SHKBP1Q8TBC3 707 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 RAD9AQ99638 391 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 SLC30A3Q99726 388 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 MRPL1Q9BYD6 325 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 CEP44Q9C0F1 390 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 GNPTGQ9UJJ9 305 aa18.14■□□□□ 0.49
PDLIM7-203ENST00000359895 PSMD12O00232 456 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 SNX2O60749 519 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PRAMEF1O95521 474 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 MLYCDO95822 493 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 RPSAP08865 295 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TSPAN8P19075 237 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 HNF1BP35680 557 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 BMPR1AP36894 532 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CLCN7P51798 805 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 STX1BP61266 288 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PTK2BQ14289 1009 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 FASTKQ14296 549 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CDKN3Q16667 212 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 GPR33Q49SQ1 333 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 DGKKQ5KSL6 1271 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PTRHD1Q6GMV3 140 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 SERPINA9Q86WD7 417 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 LEMD2Q8NC56 503 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TRPC4APQ8TEL6 797 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 EEF1AKMT1Q8WVE0 214 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 DNAJC9Q8WXX5 260 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 NAF1Q96HR8 494 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ZNF570Q96NI8 536 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 NUSAP1Q9BXS6 441 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TNKS2Q9H2K2 1166 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ASB8Q9H765 288 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 S100A14Q9HCY8 104 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PFDN4Q9NQP4 134 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 NUDT4Q9NZJ9 180 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 IKZF3Q9UKT9 509 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 MYOFQ9NZM1 2061 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TRBV5-4A0A0C4DH59 114 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 A0A1W2PQ67 120 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 NRG2O14511 850 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ACADSP16219 412 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ATP6V1C1P21283 382 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms