RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF420Q8TAQ5 688 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ADAM2Q99965 735 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TSPAN4O14817 238 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PCCBP05166 539 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 BPGMP07738 259 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PCID2Q5JVF3 399 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 GPRIN3Q6ZVF9 776 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PTGR2Q8N8N7 351 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TMEM150BA6NC51 233 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 NOTOA8MTQ0 251 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ELFN1P0C7U0 828 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 RTP1P59025 263 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PHC1P78364 1004 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 QPCTQ16769 361 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 GJD3Q8N144 294 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 CDYL2Q8N8U2 506 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 NKIRAS2Q9NYR9 191 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 EGFL7Q9UHF1 273 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 FGF10O15520 208 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 FFAR2O15552 330 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 NR4A1P22736 598 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PPP4CP60510 307 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 KCTD8Q6ZWB6 473 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 DNAJB7Q7Z6W7 309 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 C11orf24Q96F05 449 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 AKAP8O43823 692 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 METTL18O95568 372 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 C1GALT1C1Q96EU7 318 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 EBNA1BP2Q99848 306 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SGK2Q9HBY8 427 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 HDCP19113 662 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 IDI2Q9BXS1 227 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ARL8BQ9NVJ2 186 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 POLR3HQ9Y535 204 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SUV39H1O43463 412 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF806P0C7X5 589 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 NOS2P35228 1153 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 RPS9P46781 194 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ATP6V0D1P61421 351 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CPSF6Q16630 551 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 USP43Q70EL4 1123 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 RFT1Q96AA3 541 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ZC3H10Q96K80 434 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TPK1Q9H3S4 243 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 KAT8Q9H7Z6 458 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PCDHGB3Q9Y5G1 929 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PRR5-ARHGAP8B1AHC4 643 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CACNB4O00305 520 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 KDELR1P24390 212 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ARHGAP8P85298 464 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ZZZ3Q8IYH5 903 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PPCDCQ96CD2 204 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 NXNL1Q96CM4 212 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 IGSF9Q9P2J2 1179 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 FAM86C2PA6NEL3 165 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CPSF4LA6NMK7 179 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 RECQL4O94761 1208 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 AP2A2O94973 939 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CSH1P0DML2 217 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CSH2P0DML3 217 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 AQP1P29972 269 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PSEN2P49810 448 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 ZC3H12AQ5D1E8 599 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 NEPROQ6NW34 567 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TMPRSS11AQ6ZMR5 421 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 SPATA19Q7Z5L4 167 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 AMIGO2Q86SJ2 522 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PHYKPLQ8IUZ5 450 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 OR52K2Q8NGK3 314 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TOP1MTQ969P6 601 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 LINGO1Q96FE5 620 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 CEP295NLQ96MC4 621 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 NMUR2Q9GZQ4 415 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TRPV5Q9NQA5 729 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TRPV2Q9Y5S1 764 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PRR36Q9H6K5 1346 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 PLEKHG6Q3KR16 790 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 HECTD3Q5T447 861 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 LRRC70Q7Z2Q7 622 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 TRIM64BA6NI03 449 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 BCKDKO14874 412 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 RASGRP1O95267 797 aa11.44□□□□□ -0.58
SPTBN1-202ENST00000356805 MVKQ03426 396 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms