RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 EMX1Q04741 257 aaPredicted RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 KCNAB2Q13303 367 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SCIMPQ6UWF3 145 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 TMEM207Q6UWW9 146 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SLC22A9Q8IVM8 553 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 RIMKLAQ8IXN7 391 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 POC5Q8NA72 575 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 OR13J1Q8NGT2 312 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 LILRB4Q8NHJ6 448 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CNIH3Q8TBE1 160 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 C18orf25Q96B23 403 aaPredicted RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SLC52A3Q9NQ40 469 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 PRMT7Q9NVM4 692 aaPredicted RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SPO11Q9Y5K1 396 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CLDN5O00501 218 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 TBX1O43435 398 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 GABARAPO95166 117 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 ARIH2O95376 493 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 ADRA1BP35368 520 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 KCNK10P57789 538 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 UBE2UQ5VVX9 321 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 FAM86B1Q8N7N1 296 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 ZNF555Q8NEP9 628 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 FAR1Q8WVX9 515 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 CLIP3Q96DZ5 547 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 NPY6RQ99463 290 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SMOC2Q9H3U7 446 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 NEK6Q9HC98 313 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 FBXO8Q9NRD0 319 aa18.79■□□□□ 0.6
PRPF39-201ENST00000355765 SDR39U1Q9NRG7 319 aaPredicted RBP18.79■□□□□ 0.6
PRPF39-201ENST00000355765 ILVBLA1L0T0 632 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 SYCE1LA8MT33 242 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 CNTN5O94779 1100 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 CHRNA1P02708 482 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 SLC4A1P02730 911 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 LBPP18428 481 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 ITIH1P19827 911 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 ACADSBP45954 432 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 ALDH7A1P49419 539 aaKnown RBP18.78■□□□□ 0.6
PRPF39-201ENST00000355765 BACE1P56817 501 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 CCNA1P78396 465 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 AASDHQ4L235 1098 aaPredicted RBP18.78■□□□□ 0.6
PRPF39-201ENST00000355765 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRPF39-201ENST00000355765 ZDHHC13Q8IUH4 622 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 PTGR2Q8N8N7 351 aaPredicted RBP18.78■□□□□ 0.6
PRPF39-201ENST00000355765 PIK3C3Q8NEB9 887 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 RPL3LQ92901 407 aaKnown RBP18.78■□□□□ 0.6
PRPF39-201ENST00000355765 UTS2RQ9UKP6 389 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 INVSQ9Y283 1065 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 TIMM22Q9Y584 194 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 TTC34A8MYJ7 566 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 AZIN1O14977 448 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 RFPL2O75678 378 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 PRKACGP22612 351 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 SERPINB10P48595 397 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 UFM1P61960 85 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 PLA2G4EQ3MJ16 856 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 TTC23Q5W5X9 447 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 TXNDC11Q6PKC3 985 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 CALML6Q8TD86 181 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 TXNDC15Q96J42 360 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 BTBD2Q9BX70 525 aa18.78■□□□□ 0.6
PRPF39-201ENST00000355765 A0A1W2PP18 115 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 NOTOA8MTQ0 251 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 G3V2T6 193 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 UBXN8O00124 270 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 DAB1O75553 588 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 BEST1O76090 585 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 VTNP04004 478 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 POLD2P49005 469 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 MYLKQ15746 1914 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 FKBP1CQ5VVH2 108 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 DENND5AQ6IQ26 1287 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 WNT8BQ93098 351 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 PTERQ96BW5 349 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 ZNF419Q96HQ0 510 aaPredicted RBP18.77■□□□□ 0.6
PRPF39-201ENST00000355765 RNF38Q9H0F5 515 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 CARS2Q9HA77 564 aaKnown RBP18.77■□□□□ 0.6
PRPF39-201ENST00000355765 DFFAO00273 331 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 SLC22A1O15245 554 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 CDH1P12830 882 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 PSMB9P28065 219 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 MTPNP58546 118 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 GALNT1Q10472 559 aaPredicted RBP18.77■□□□□ 0.6
PRPF39-201ENST00000355765 SELPLGQ14242 412 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 HECTD2Q5U5R9 776 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 LYSMD2Q8IV50 215 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 SLC22A15Q8IZD6 547 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 DTWD1Q8N5C7 304 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 FBXO30Q8TB52 745 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 NUDT8Q8WV74 236 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 MAGEE1Q9HCI5 957 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 ERVK-18Q9QC07 812 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 NUDT5Q9UKK9 219 aa18.77■□□□□ 0.6
PRPF39-201ENST00000355765 LCTP09848 1927 aa18.76■□□□□ 0.59
PRPF39-201ENST00000355765 GAS2O43903 313 aaKnown RBP18.76■□□□□ 0.59
PRPF39-201ENST00000355765 PTPRAP18433 802 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms