RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SNX31Q8N9S9 440 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 ITFG1Q8TB96 612 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 HEXDCQ8WVB3 486 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 MRPS31Q92665 395 aaKnown RBP8.57□□□□□ -1.04
TRIM55-204ENST00000353317 LINC00597Q9H2U6 94 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 MRPL46Q9H2W6 279 aaKnown RBP8.57□□□□□ -1.04
TRIM55-204ENST00000353317 NT5MQ9NPB1 228 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 TIMMDC1Q9NPL8 285 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 ASAH2Q9NR71 780 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 CCDC167Q9P0B6 97 aa8.57□□□□□ -1.04
TRIM55-204ENST00000353317 TRIM24O15164 1050 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 NPHS1O60500 1241 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SNAP91O60641 907 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TBL1XO60907 577 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 H6PDO95479 791 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF23P17027 643 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 KCNA5P22460 613 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ARCN1P48444 511 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TAS2R39P59534 338 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF33AQ06730 810 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 KCNC3Q14003 757 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 GPR158Q5T848 1215 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 KLC3Q6P597 504 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PKN3Q6P5Z2 889 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 LINGO4Q6UY18 593 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CYP2R1Q6VVX0 501 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TPGS1Q6ZTW0 290 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CHSY3Q70JA7 882 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PIWIL4Q7Z3Z4 852 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CARM1Q86X55 608 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 RNF135Q8IUD6 432 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 FAM217AQ8IXS0 508 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TEX26Q8N6G2 289 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ARRDC2Q8TBH0 407 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 LPGAT1Q92604 370 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ALG14Q96F25 216 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 MRGPRX2Q96LB1 330 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PHF12Q96QT6 1004 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 VAT1Q99536 393 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CIB1Q99828 191 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CCT7Q99832 543 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 APOL5Q9BWW9 433 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 MTIF3Q9H2K0 278 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 POMKQ9H5K3 350 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 OLAHQ9NV23 265 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SLC2A6Q9UGQ3 507 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 HEMK1Q9Y5R4 338 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SNX13Q9Y5W8 968 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TRIOBPQ9H2D6 2365 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 A0A0J9YVX5 310 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 H0YJX3 145 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 AURKAO14965 403 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PRAMEF11O60813 436 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PMPCBO75439 489 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 MT-CO1P00395 513 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PTPN2P17706 415 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ADRA1AP35348 466 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SLC1A2P43004 574 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 NRIP1P48552 1158 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 MAPKAPK2P49137 400 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CDH4P55283 916 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ARF5P84085 180 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 UGP2Q16851 508 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PCID2Q5JVF3 399 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 REP15Q6BDI9 236 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 HMBOX1Q6NT76 420 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TMC5Q6UXY8 1006 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 HTR3DQ70Z44 454 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF354CQ86Y25 554 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CMTM8Q8IZV2 173 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TRIML2Q8N7C3 387 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PNPLA1Q8N8W4 532 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SMIM14Q96QK8 99 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 FCRL5Q96RD9 977 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 MRPL57Q9BQC6 102 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 TMEM79Q9BSE2 394 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SPON2Q9BUD6 331 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 OSBPL11Q9BXB4 747 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CAAP1Q9H8G2 361 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 NOL11Q9H8H0 719 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 LIN28AQ9H9Z2 209 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 CYP4F12Q9HCS2 524 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 RSL24D1Q9UHA3 163 aaKnown RBP8.56□□□□□ -1.04
TRIM55-204ENST00000353317 SARDHQ9UL12 918 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 OR51B4Q9Y5P0 310 aa8.56□□□□□ -1.04
TRIM55-204ENST00000353317 PLOD2O00469 737 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 LINC01565O15544 149 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ZNF189O75820 626 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 C1RP00736 705 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CKMT2P17540 419 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 CEBPBP17676 345 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 STX5Q13190 355 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 FASTKQ14296 549 aaKnown RBP8.55□□□□□ -1.04
TRIM55-204ENST00000353317 PRPSAP1Q14558 356 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 ADRM1Q16186 407 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 AGKQ53H12 422 aa8.55□□□□□ -1.04
TRIM55-204ENST00000353317 C6orf10Q5SRN2 563 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms