RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RTN4RL1Q86UN2 441 aaPredicted RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 EGFL6Q8IUX8 553 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 MDGA1Q8NFP4 955 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 CENPNQ96H22 339 aaPredicted RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 BTN2A3PQ96KV6 586 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SYT17Q9BSW7 474 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SPON2Q9BUD6 331 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 BPIFA1Q9NP55 256 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 TRMT13Q9NUP7 481 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 GID8Q9NWU2 228 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 IRAK4Q9NWZ3 460 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SNAP29O95721 258 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SCNN1BP51168 640 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 HK3P52790 923 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 PTPRNQ16849 979 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SLC36A3Q495N2 470 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 ANKS6Q68DC2 871 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 ZBTB46Q86UZ6 589 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 ATP6V0D2Q8N8Y2 350 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 MFSD2AQ8NA29 543 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 SIDT2Q8NBJ9 832 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 RHEBL1Q8TAI7 183 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 STAG3L4Q8TBR4 150 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 FBXO32Q969P5 355 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 RMDN1Q96DB5 314 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 PCDHB8Q9UN66 801 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 MAGED1Q9Y5V3 778 aaPredicted RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 A0A1W2PP18 115 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 IQCF5A8MTL0 148 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 NIPSNAP2O75323 286 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 TYMPP19971 482 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 ADARP55265 1226 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 INTS11Q5TA45 600 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 GPR150Q8NGU9 434 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 HM13Q8TCT9 377 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 NAA50Q9GZZ1 169 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 RPF2Q9H7B2 306 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 THEGQ9P2T0 379 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 SCN4AP35499 1836 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 CLOCKO15516 846 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 B4GAT1O43505 415 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 PRAMEF11O60813 436 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 KERAO60938 352 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 MATN4O95460 622 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 VARSP26640 1264 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 MAPK10P53779 464 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 TNK2Q07912 1038 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 PMS2P3Q13401 168 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 ATP6AP1Q15904 470 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 SLC2A7Q6PXP3 512 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 CDYL2Q8N8U2 506 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 ABTB1Q969K4 478 aaPredicted RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 C12orf43Q96C57 262 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 ISOC1Q96CN7 298 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 KCTD14Q9BQ13 255 aaPredicted RBP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 TIMMDC1Q9NPL8 285 aa17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.96■□□□□ 0.47
PTP4A3-202ENST00000349124 TCRBV5S2A0A599 114 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 DRGXA6NNA5 263 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 BMP10O95393 424 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 C1RP00736 705 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 FGF1P05230 155 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 IDO1P14902 403 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 MYF6P23409 242 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 ENTPD1P49961 510 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 DCTN2Q13561 401 aaKnown RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 ZIK1Q3SY52 487 aaPredicted RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 OTUD3Q5T2D3 398 aaPredicted RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 NANOGP8Q6NSW7 305 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 GPR141Q7Z602 305 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 OR52B6Q8NGF0 335 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 EEF1AKMT1Q8WVE0 214 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 ZNF599Q96NL3 588 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 HGH1Q9BTY7 390 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 NANOGQ9H9S0 305 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 SARS2Q9NP81 518 aaKnown RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 FADS3Q9Y5Q0 445 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 TNPO2O14787 897 aaKnown RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 PFDN1O60925 122 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 OR4F21O95013 312 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 ATE1O95260 518 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 HLA-DPA1P20036 260 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 KCNK10P57789 538 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 OR4D2P58180 307 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 TUBA4AP68366 448 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 MYBPC3Q14896 1274 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 RBBP7Q16576 425 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 LGI2Q8N0V4 545 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 C2orf69Q8N8R5 385 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 TAS2R13Q9NYV9 303 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 EIF2B4Q9UI10 523 aaKnown RBP17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 PCDHGC4Q9Y5F7 938 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
PTP4A3-202ENST00000349124 NLRC5Q86WI3 1866 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 NDUFS3O75489 264 aa17.94■□□□□ 0.46
PTP4A3-202ENST00000349124 SERPINF2P08697 491 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms