RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 SGF29Q96ES7 293 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ATP6V1G3Q96LB4 118 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 RPRD1AQ96P16 312 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SERPINB12Q96P63 405 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 PPP1R2P1Q96PQ5 205 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CCDC3Q9BQI4 270 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 LRRC61Q9BV99 259 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 CLPBQ9H078 707 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 XAB2Q9HCS7 855 aaKnown RBP9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SAYSD1Q9NPB0 183 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 VPS28Q9UK41 221 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 SNX10Q9Y5X0 201 aa9.72□□□□□ -0.85
MRPL55-204ENST00000348259 ARHGEF17Q96PE2 2063 aaPredicted RBP9.71□□□□□ -0.85
MRPL55-204ENST00000348259 SPTBN1Q01082 2364 aaKnown RBP9.71□□□□□ -0.85
MRPL55-204ENST00000348259 A0A087WUV0 522 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 A0A0D9SEW6 157 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 A0A1W2PQM1 296 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TCRBV7S3A2A0A539 114 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CPED1A4D0V7 1026 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 E7EVH7 732 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 H3BM21 787 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PLD2O14939 933 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 MATN3O15232 486 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PSMD3O43242 534 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 MAFKO60675 156 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TMEM63AO94886 807 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 SUN1O94901 812 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PCDH8O95206 1070 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 MAP3K6O95382 1288 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 METTL18O95568 372 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 IVLP07476 585 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 GSTA2P09210 222 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 JUNDP17535 347 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PTPN3P26045 913 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CCKBRP32239 447 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 UGT1A5P35504 534 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ABL2P42684 1182 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 NEK3P51956 506 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 YBEYP58557 167 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CCDC15Q0P6D6 951 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PDIA2Q13087 525 aaKnown RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 EIF3IQ13347 325 aaKnown RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TGIF1Q15583 401 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CCDC38Q502W7 563 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TTMPQ5BVD1 217 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 DNAJC21Q5F1R6 531 aaKnown RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ARSIQ5FYB1 569 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 FNBP1LQ5T0N5 605 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ITPRIPL1Q6GPH6 555 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ATG14Q6ZNE5 492 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CYS1Q717R9 158 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 SETD3Q86TU7 594 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 DTX1Q86Y01 620 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TDRPQ86YL5 185 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CNPY4Q8N129 248 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ZNF567Q8N184 647 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 EXTL1Q92935 676 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 NAT6Q93015 286 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ARL8AQ96BM9 186 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CENPTQ96BT3 561 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TEKT5Q96M29 485 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 PWWP2AQ96N64 755 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 IL12RB2Q99665 862 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-204ENST00000348259 LRRC4CQ9HCJ2 640 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 IL36AQ9UHA7 158 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 TEX264Q9Y6I9 313 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 ANKRD36A6QL64 1941 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 NOTCH2Q04721 2471 aa9.71□□□□□ -0.86
MRPL55-204ENST00000348259 CXorf51AA0A1B0GTR3 108 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 GOLGA6CA6NDK9 693 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 D6RAR5 112 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 AP3B1O00203 1094 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 RASGRF2O14827 1237 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 AREL1O15033 823 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 MUSKO15146 869 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 NVLO15381 856 aaKnown RBP9.7□□□□□ -0.86
MRPL55-204ENST00000348259 YY2O15391 372 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 BNIP3LO60238 219 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 AGTP01019 485 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 SHBGP04278 402 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 APRTP07741 180 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 CELA2BP08218 269 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-204ENST00000348259 GOLGA6DP0CG33 693 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 PHBP35232 272 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 IGFALSP35858 605 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 MMP13P45452 471 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 SERPINH1P50454 418 aaKnown RBP9.7□□□□□ -0.86
MRPL55-204ENST00000348259 CBX1P83916 185 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 ARF5P84085 180 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 GABPB1Q06547 395 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-204ENST00000348259 PDE1CQ14123 709 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-204ENST00000348259 KRT71Q3SY84 523 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 PARP15Q460N3 678 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 ARMC3Q5W041 872 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 LRRC8BQ6P9F7 803 aa9.7□□□□□ -0.86
MRPL55-204ENST00000348259 LINGO4Q6UY18 593 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms