RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PQLC1Q8N2U9 271 aa14.61□□□□□ -0.07
RET-201ENST00000340058 CXorf40AQ8TE69 158 aa14.61□□□□□ -0.07
RET-201ENST00000340058 OTUB1Q96FW1 271 aaPredicted RBP14.61□□□□□ -0.07
RET-201ENST00000340058 PANX1Q96RD7 426 aa14.61□□□□□ -0.07
RET-201ENST00000340058 IMP3Q9NV31 184 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 DPP7Q9UHL4 492 aa14.61□□□□□ -0.07
RET-201ENST00000340058 GNEQ9Y223 722 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 DHRS12A0PJE2 317 aa14.61□□□□□ -0.07
RET-201ENST00000340058 ERAL1O75616 437 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 HNRNPCP07910 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
RET-201ENST00000340058 EPORP19235 508 aa14.61□□□□□ -0.07
RET-201ENST00000340058 MAPKAPK2P49137 400 aa14.61□□□□□ -0.07
RET-201ENST00000340058 RAD23AP54725 363 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PPP1R8Q12972 351 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 GPR17Q13304 367 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PDK3Q15120 406 aa14.61□□□□□ -0.07
RET-201ENST00000340058 IRGCQ6NXR0 463 aa14.61□□□□□ -0.07
RET-201ENST00000340058 C17orf99Q6UX52 265 aa14.61□□□□□ -0.07
RET-201ENST00000340058 Q6ZVU0 165 aa14.61□□□□□ -0.07
RET-201ENST00000340058 AP2M1Q96CW1 435 aa14.61□□□□□ -0.07
RET-201ENST00000340058 OXCT2Q9BYC2 517 aaPredicted RBP14.61□□□□□ -0.07
RET-201ENST00000340058 NKX1-2Q9UD57 310 aaPredicted RBP14.61□□□□□ -0.07
RET-201ENST00000340058 STK16O75716 305 aa14.6□□□□□ -0.07
RET-201ENST00000340058 MAT2AP31153 395 aaKnown RBP14.6□□□□□ -0.07
RET-201ENST00000340058 SMARCB1Q12824 385 aa14.6□□□□□ -0.07
RET-201ENST00000340058 PPP1R15BQ5SWA1 713 aa14.6□□□□□ -0.07
RET-201ENST00000340058 LPCAT2Q7L5N7 544 aa14.6□□□□□ -0.07
RET-201ENST00000340058 EPB41L4BQ9H329 900 aa14.6□□□□□ -0.07
RET-201ENST00000340058 FAM83DQ9H4H8 585 aa14.6□□□□□ -0.07
RET-201ENST00000340058 PAPOLBQ9NRJ5 636 aaKnown RBP14.6□□□□□ -0.07
RET-201ENST00000340058 TRAFD1O14545 582 aaPredicted RBP14.6□□□□□ -0.07
RET-201ENST00000340058 SLC9A3R1O14745 358 aaPredicted RBP14.6□□□□□ -0.07
RET-201ENST00000340058 RASSF9O75901 435 aa14.6□□□□□ -0.07
RET-201ENST00000340058 COL6A2P12110 1019 aa14.6□□□□□ -0.07
RET-201ENST00000340058 GLDCP23378 1020 aa14.6□□□□□ -0.07
RET-201ENST00000340058 PRKCHP24723 683 aa14.6□□□□□ -0.07
RET-201ENST00000340058 SLC22A17Q8WUG5 538 aa14.6□□□□□ -0.07
RET-201ENST00000340058 ZNF296Q8WUU4 475 aaPredicted RBP14.6□□□□□ -0.07
RET-201ENST00000340058 ARNTL2Q8WYA1 636 aa14.6□□□□□ -0.07
RET-201ENST00000340058 GPSM3Q9Y4H4 160 aa14.6□□□□□ -0.07
RET-201ENST00000340058 COL4A1P02462 1669 aa14.6□□□□□ -0.07
RET-201ENST00000340058 ANKDD1BA6NHY2 528 aa14.6□□□□□ -0.07
RET-201ENST00000340058 TBX10O75333 385 aa14.6□□□□□ -0.07
RET-201ENST00000340058 KCNH1O95259 989 aa14.6□□□□□ -0.07
RET-201ENST00000340058 TMPRSS11BQ86T26 416 aa14.6□□□□□ -0.07
RET-201ENST00000340058 OOSP2Q86WS3 158 aa14.6□□□□□ -0.07
RET-201ENST00000340058 ZC3H7AQ8IWR0 971 aaKnown RBP14.6□□□□□ -0.07
RET-201ENST00000340058 KCNA7Q96RP8 456 aa14.6□□□□□ -0.07
RET-201ENST00000340058 TRIM45Q9H8W5 580 aaPredicted RBP14.6□□□□□ -0.07
RET-201ENST00000340058 SSU72Q9NP77 194 aaKnown RBP14.6□□□□□ -0.07
RET-201ENST00000340058 ARHGEF3Q9NR81 526 aa14.6□□□□□ -0.07
RET-201ENST00000340058 SNX6Q9UNH7 406 aa14.6□□□□□ -0.07
RET-201ENST00000340058 WNT6Q9Y6F9 365 aa14.6□□□□□ -0.07
RET-201ENST00000340058 A8MT66 165 aa14.6□□□□□ -0.07
RET-201ENST00000340058 DNAJA2O60884 412 aa14.6□□□□□ -0.07
RET-201ENST00000340058 CLDN7O95471 211 aa14.6□□□□□ -0.07
RET-201ENST00000340058 CSF2RAP15509 400 aa14.6□□□□□ -0.07
RET-201ENST00000340058 DSG4Q86SJ6 1040 aa14.6□□□□□ -0.07
RET-201ENST00000340058 GPR180Q86V85 440 aa14.6□□□□□ -0.07
RET-201ENST00000340058 CFAP206Q8IYR0 622 aa14.6□□□□□ -0.07
RET-201ENST00000340058 TMEM132CQ8N3T6 1108 aa14.6□□□□□ -0.07
RET-201ENST00000340058 OSCP1Q8WVF1 389 aa14.6□□□□□ -0.07
RET-201ENST00000340058 NACC2Q96BF6 587 aa14.6□□□□□ -0.07
RET-201ENST00000340058 ALG2Q9H553 416 aa14.6□□□□□ -0.07
RET-201ENST00000340058 TMCC3Q9ULS5 477 aa14.6□□□□□ -0.07
RET-201ENST00000340058 POMPQ9Y244 141 aa14.6□□□□□ -0.07
RET-201ENST00000340058 AP4B1Q9Y6B7 739 aa14.6□□□□□ -0.07
RET-201ENST00000340058 KCNE2Q9Y6J6 123 aa14.6□□□□□ -0.07
RET-201ENST00000340058 COL2A1P02458 1487 aaPredicted RBP14.59□□□□□ -0.07
RET-201ENST00000340058 RGS5O15539 181 aa14.59□□□□□ -0.07
RET-201ENST00000340058 CYP4B1P13584 511 aa14.59□□□□□ -0.07
RET-201ENST00000340058 LSM3P62310 102 aaKnown RBP14.59□□□□□ -0.07
RET-201ENST00000340058 MAD2L1Q13257 205 aaPredicted RBP14.59□□□□□ -0.07
RET-201ENST00000340058 CST9Q5W186 159 aa14.59□□□□□ -0.07
RET-201ENST00000340058 DPY19L2P1Q6NXN4 242 aa14.59□□□□□ -0.07
RET-201ENST00000340058 FRMD7Q6ZUT3 714 aa14.59□□□□□ -0.07
RET-201ENST00000340058 TREML1Q86YW5 311 aa14.59□□□□□ -0.07
RET-201ENST00000340058 PPP3R2Q96LZ3 170 aa14.59□□□□□ -0.07
RET-201ENST00000340058 TRMOQ9BU70 441 aa14.59□□□□□ -0.07
RET-201ENST00000340058 EBPLQ9BY08 206 aa14.59□□□□□ -0.07
RET-201ENST00000340058 TRIM8Q9BZR9 551 aa14.59□□□□□ -0.07
RET-201ENST00000340058 SCML2Q9UQR0 700 aa14.59□□□□□ -0.07
RET-201ENST00000340058 EPN2O95208 641 aa14.59□□□□□ -0.07
RET-201ENST00000340058 SPAM1P38567 509 aa14.59□□□□□ -0.07
RET-201ENST00000340058 THOP1P52888 689 aa14.59□□□□□ -0.07
RET-201ENST00000340058 FOLH1Q04609 750 aa14.59□□□□□ -0.07
RET-201ENST00000340058 LCP2Q13094 533 aa14.59□□□□□ -0.07
RET-201ENST00000340058 SPIDRQ14159 915 aa14.59□□□□□ -0.07
RET-201ENST00000340058 ACAP2Q15057 778 aa14.59□□□□□ -0.07
RET-201ENST00000340058 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
RET-201ENST00000340058 RAVER1Q8IY67 606 aaKnown RBP14.59□□□□□ -0.07
RET-201ENST00000340058 BBS4Q96RK4 519 aa14.59□□□□□ -0.07
RET-201ENST00000340058 MTERF1Q99551 399 aaKnown RBP14.59□□□□□ -0.07
RET-201ENST00000340058 RTKNQ9BST9 563 aa14.59□□□□□ -0.07
RET-201ENST00000340058 AARSD1Q9BTE6 412 aaKnown RBP14.59□□□□□ -0.07
RET-201ENST00000340058 TEX12Q9BXU0 123 aa14.59□□□□□ -0.07
RET-201ENST00000340058 S100A14Q9HCY8 104 aa14.59□□□□□ -0.07
RET-201ENST00000340058 RFXANKO14593 260 aa14.59□□□□□ -0.07
RET-201ENST00000340058 MGRN1O60291 552 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms