RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SOCS2O14508 198 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 TPD52L2O43399 206 aaKnown RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 KCNE1P15382 129 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 PURAQ00577 322 aaKnown RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 OR4D1Q15615 310 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 UGT3A1Q6NUS8 523 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 PHACTR4Q8IZ21 702 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 OR10A6Q8NH74 314 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 ITFG1Q8TB96 612 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 SNX19Q92543 992 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 CCDC126Q96EE4 140 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 RIBC2Q9H4K1 309 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 C7orf72A4D263 438 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 PRR23AA6NEV1 266 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 TMX2-CTNND1H3BSU7 103 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 ITPKAP23677 461 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 PPP3CCP48454 512 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 TRPC1P48995 793 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 SLC11A2P49281 568 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 IL2P60568 153 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 FAM189BP81408 668 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 CBX3Q13185 183 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
USP1-201ENST00000339950 MAMDC4Q6UXC1 1216 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 MON1AQ86VX9 555 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 KIFC1Q9BW19 673 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 BBS2Q9BXC9 721 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 LTB4R2Q9NPC1 389 aa11.87□□□□□ -0.51
USP1-201ENST00000339950 A0A1W2PPW3 197 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ARVCFO00192 962 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 CDK14O94921 469 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 GJB5O95377 273 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 POU1F1P28069 291 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PCSK6P29122 969 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 OXTRP30559 389 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 BNIP3Q12983 259 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 MS4A13Q5J8X5 152 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SCD5Q86SK9 330 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ARHGAP12Q8IWW6 846 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ZNF366Q8N895 744 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ZNF419Q96HQ0 510 aaPredicted RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PLEKHG4BQ96PX9 1271 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ECI2O75521 394 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ATP5BP06576 529 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 HALP42357 657 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 CYP4F2P78329 520 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 MYBPC1Q00872 1141 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 CYP4F3Q08477 520 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 IKBKEQ14164 716 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PTGR1Q14914 329 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 GLYATQ6IB77 296 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 C11orf96Q7Z7L8 435 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 CILP2Q8IUL8 1156 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 CDKN2AIPNLQ96HQ2 116 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ZIC5Q96T25 663 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 MYOCQ99972 504 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ACBD6Q9BR61 282 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 KIF17Q9P2E2 1029 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 AGO1Q9UL18 857 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 ORC6Q9Y5N6 252 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 K7ERQ8 282 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SERPIND1P05546 499 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 HSMCR30P0CW71 290 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 IL7RP16871 459 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PSMB9P28065 219 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 C21orf59P57076 290 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PRKCQQ04759 706 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 PRKCZQ05513 592 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 OR2T34Q8NGX1 318 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 OR2T3Q8NH03 318 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 NTAN1Q96AB6 310 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 DPY30Q9C005 99 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SMURF2Q9HAU4 748 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 RAI2Q9Y5P3 530 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 COL1A2P08123 1366 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 FGF10O15520 208 aaPredicted RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 TOMM70O94826 608 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 SNAP29O95721 258 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 C1RP00736 705 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 CAPN3P20807 821 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
USP1-201ENST00000339950 ENTPD1P49961 510 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 GNA12Q03113 381 aa11.86□□□□□ -0.51
USP1-201ENST00000339950 UPP1Q16831 310 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms