RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 NRF1Q16656 503 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 CNPY1Q3B7I2 92 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 ADCY4Q8NFM4 1077 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 MDGA1Q8NFP4 955 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 LRTOMTQ8WZ04 291 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 SEMA4BQ9NPR2 832 aaPredicted RBP16.22■□□□□ 0.19
LITAF-201ENST00000339430 GALPQ9UBC7 116 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 APPL1Q9UKG1 709 aa16.22■□□□□ 0.19
LITAF-201ENST00000339430 MYOCOSA0A1B0GUC4 107 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 AZIN1O14977 448 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 GRM6O15303 877 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 DENRO43583 198 aaKnown RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 ACSL4O60488 711 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 CLASP2O75122 1294 aaKnown RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 PENKP01210 267 aaPredicted RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 EPOP01588 193 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 LINC00032P0C843 101 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 GPX3P22352 226 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 EEF1DP29692 281 aaKnown RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 VEPH1Q14D04 833 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 SATL1Q86VE3 508 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 RETREG3Q86VR2 466 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 MARVELD2Q8N4S9 558 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 MGME1Q9BQP7 344 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 SARDHQ9UL12 918 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 RNF112Q9ULX5 631 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 AP4S1Q9Y587 144 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 PCDHGC4Q9Y5F7 938 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 IRAK3Q9Y616 596 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 CDH23Q9H251 3354 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 A0A0J9YYE9 177 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 C5orf67F2Z3F1 127 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 PIM1P11309 404 aaPredicted RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 ETS2P15036 469 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 OGNP20774 298 aaKnown RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 SUOXP51687 545 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 EPHB3P54753 998 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 PLD1Q13393 1074 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 TSNQ15631 228 aaKnown RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 SETMARQ53H47 684 aaPredicted RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 DNAJB7Q7Z6W7 309 aaPredicted RBP16.21■□□□□ 0.19
LITAF-201ENST00000339430 BBS5Q8N3I7 341 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 CATSPER1Q8NEC5 780 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 EME1Q96AY2 570 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 SPATA16Q9BXB7 569 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 TUBB1Q9H4B7 451 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 Q9H521 79 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 SEPT3Q9UH03 358 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 RAB26Q9ULW5 256 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 MED16Q9Y2X0 877 aa16.21■□□□□ 0.19
LITAF-201ENST00000339430 CDC7O00311 574 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 TSPAN3O60637 253 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 GSTT1P30711 240 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 ATP5C1P36542 298 aaKnown RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 PBX2P40425 430 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 ZNF140P52738 457 aaPredicted RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 OXCT1P55809 520 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 RPL26P61254 145 aaKnown RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 LAMB3Q13751 1172 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 CAMK1Q14012 370 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 TYSND1Q2T9J0 566 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 VPS26BQ4G0F5 336 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 LILRA6Q6PI73 481 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 LPCAT1Q8NF37 534 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 SLCO4A1Q96BD0 722 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 TUBGCP3Q96CW5 907 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 MYRFLQ96LU7 910 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 PRICKLE1Q96MT3 831 aaPredicted RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 GPR21Q99679 349 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 CCDC68Q9H2F9 335 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 BPIFA1Q9NP55 256 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 GKN1Q9NS71 199 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 NLE1Q9NVX2 485 aaPredicted RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 TMEM181Q9P2C4 612 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 DNMT3LQ9UJW3 386 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 MAFFQ9ULX9 164 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 YBX2Q9Y2T7 364 aaKnown RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 TIMM22Q9Y584 194 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 MYO7AQ13402 2215 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 ZNF840PA6NDX5 716 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 CBX4O00257 560 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 SCAMP3O14828 347 aaKnown RBP16.2■□□□□ 0.18
LITAF-201ENST00000339430 NDUFS3O75489 264 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 SMIM18P0DKX4 95 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 IRF1P10914 325 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 IRS1P35568 1242 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 PSMD8P48556 350 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 C6orf10Q5SRN2 563 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 IYDQ6PHW0 289 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 TMEM126BQ8IUX1 230 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 FBXO39Q8N4B4 442 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 EFHBQ8N7U6 833 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 FAM110BQ8TC76 370 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 PEX13Q92968 403 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 ZNF599Q96NL3 588 aa16.2■□□□□ 0.18
LITAF-201ENST00000339430 PSKH2Q96QS6 385 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms