RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 RBM44Q6ZP01 1051 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 CRYBG2Q8N1P7 616 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 C11orf65Q8NCR3 313 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 OVCA2Q8WZ82 227 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PIK3R3Q92569 461 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 SLC25A36Q96CQ1 311 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 COPS8Q99627 209 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 HIPK3Q9H422 1215 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 KIAA1522Q9P206 1035 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 EVLQ9UI08 416 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 FKTNO75072 461 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 LYPLA1O75608 230 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF16P17020 682 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PCBP2Q15366 365 aaKnown RBP eCLIP11.72□□□□□ -0.537e-7■■■■□ 24.6
SHANK2-201ENST00000338508 TTC27Q6P3X3 843 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 CHST9Q7L1S5 443 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 RBFAQ8N0V3 343 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 SHC3Q92529 594 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 GTPBP3Q969Y2 492 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 APOLD1Q96LR9 279 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 CTPS2Q9NRF8 586 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PFDN2Q9UHV9 154 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 ADAM28Q9UKQ2 775 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 MAPRE3Q9UPY8 281 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 TMEM5Q9Y2B1 443 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 GRK5P34947 590 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 MECP2P51608 486 aaKnown RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PDK3Q15120 406 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 TMPRSS11AQ6ZMR5 421 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 TESCQ96BS2 214 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 CCDC120Q96HB5 630 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PPM1MQ96MI6 270 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF285Q96NJ3 590 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 IL12RB2Q99665 862 aa11.72□□□□□ -0.53
SHANK2-201ENST00000338508 PDP1Q9P0J1 537 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-201ENST00000338508 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 CLDN4O14493 209 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 KERAO60938 352 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF844Q08AG5 666 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 VAT1Q99536 393 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 TMCO1Q9UM00 188 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 CEP152O94986 1710 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 DHRS12A0PJE2 317 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 CPED1A4D0V7 1026 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 AP5Z1O43299 807 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF823P16415 610 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 HFE2Q6ZVN8 426 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 RAB11FIP2Q7L804 512 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 PIGZQ86VD9 579 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 MPP5Q8N3R9 675 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 PIK3C3Q8NEB9 887 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 RBM18Q96H35 190 aaKnown RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 FUT8Q9BYC5 575 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 MID1O15344 667 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 ATG13O75143 517 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 CAPN13Q6MZZ7 669 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 GK5Q6ZS86 529 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 CIR1Q86X95 450 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 HCAR2Q8TDS4 363 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 MRPL57Q9BQC6 102 aaKnown RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 TBC1D17Q9HA65 648 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 PNPLA8Q9NP80 782 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 PHPT1Q9NRX4 125 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 MALT1Q9UDY8 824 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
SHANK2-201ENST00000338508 RPTORQ8N122 1335 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 TECPR2O15040 1411 aa11.71□□□□□ -0.53
SHANK2-201ENST00000338508 GRM6O15303 877 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 GJA1P17302 382 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 MTTPP55157 894 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 RGS8P57771 180 aaPredicted RBP11.71□□□□□ -0.54
SHANK2-201ENST00000338508 SPIN3Q5JUX0 258 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 SPERTQ8NA61 448 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF224Q9NZL3 707 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 H3BQF6 201 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 GATBO75879 557 aaKnown RBP11.71□□□□□ -0.54
SHANK2-201ENST00000338508 CCNB2O95067 398 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 PPP4CP60510 307 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 SP2Q02086 613 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 RFWD3Q6PCD5 774 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 ZNF627Q7L945 461 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 ADAMTSL2Q86TH1 951 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 ANKRD46Q86W74 232 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 C8orf48Q96LL4 319 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 UROC1Q96N76 676 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 HBEGFQ99075 208 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 L1RE1Q9UN81 338 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.54
SHANK2-201ENST00000338508 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms