RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CXorf40AQ8TE69 158 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ATL1Q8WXF7 558 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TSSK3Q96PN8 268 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 HTATIP2Q9BUP3 242 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 NHSQ6T4R5 1651 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 BBIP1A8MTZ0 92 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZSCAN9O15535 394 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 POP4O95707 220 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 GPR1P46091 355 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SGCGQ13326 291 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PIK3R6Q5UE93 754 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZBTB2Q8N680 514 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 IGSF8Q969P0 613 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SUFUQ9UMX1 484 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 STRCQ7RTU9 1775 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ECM29Q5VYK3 1845 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 KCNH1O95259 989 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 GPC1P35052 558 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 XKR6Q5GH73 641 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZDHHC20Q5W0Z9 365 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TCF25Q9BQ70 676 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RAD18Q9NS91 495 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CD84Q9UIB8 345 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 A0A0D9SEW6 157 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 WDR47O94967 919 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PGM3O95394 542 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 S1PR4O95977 384 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ABCB1P08183 1280 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ELFN1P0C7U0 828 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 IRX1P78414 480 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PPIGQ13427 754 aaKnown RBP eCLIP6.25□□□□□ -1.411e-6■■□□□ 12.7
PRKDC-202ENST00000338368 ATXN7L2Q5T6C5 722 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 DOK6Q6PKX4 331 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 OR2AP1Q8NGE2 309 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 HBEGFQ99075 208 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 COCHO43405 550 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 NIPSNAP2O75323 286 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 STK16O75716 305 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 UROSP10746 265 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PRDX6P30041 224 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TNK2Q07912 1038 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TMEM198Q66K66 360 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 STEAP4Q687X5 459 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PHACTR4Q8IZ21 702 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF490Q9ULM2 529 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 OR2AG2A6NM03 316 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 FGF19O95750 216 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CCNFP41002 786 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ACTR3P61158 418 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PAOXQ6QHF9 649 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C11orf96Q7Z7L8 435 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CEP19Q96LK0 163 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CIB1Q99828 191 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 AARSD1Q9BTE6 412 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 NUDT4Q9NZJ9 180 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 AP3M1Q9Y2T2 418 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF711Q9Y462 761 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 DYTNA2CJ06 578 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SLC22A3O75751 556 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 EPOP01588 193 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 NSG1P42857 185 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RAB41Q5JT25 222 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF621Q6ZSS3 439 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 COLGALT2Q8IYK4 626 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TMEM132CQ8N3T6 1108 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SH3RF2Q8TEC5 729 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 WDR60Q8WVS4 1066 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 POLR3BQ9NW08 1133 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C6orf203Q9P0P8 240 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 KCNE2Q9Y6J6 123 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SYNDIG1LA6NDD5 238 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TMEM233B4DJY2 109 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 PIP5K1BO14986 540 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 COX7A2P14406 83 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 GCAP28676 217 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CHI3L1P36222 383 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TMED1Q13445 227 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 VPS26BQ4G0F5 336 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ARNTL2Q8WYA1 636 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C19orf60Q96EN9 201 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RMND5BQ96G75 393 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SPATA17Q96L03 361 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 HEPHQ9BQS7 1158 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 EIF2B4Q9UI10 523 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 MATN2O00339 956 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 ALDH1A2O94788 518 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CAPN1P07384 714 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 SLC26A3P40879 764 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RAET1GQ6H3X3 334 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 EEF1AKMT1Q8WVE0 214 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 NMD3Q96D46 503 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 COPG1Q9Y678 874 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 C4AP0C0L4 1744 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TTC36A6NLP5 189 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 TMEM189-UBE2V1I3L0A0 370 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RALGDSQ12967 914 aa6.25□□□□□ -1.41
PRKDC-202ENST00000338368 RANBP10Q6VN20 620 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms