RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 LRRC49Q8IUZ0 686 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 GALNT6Q8NCL4 622 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 OR6C1Q96RD1 312 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 WDR24Q96S15 920 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TDRD1Q9BXT4 1180 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CARD9Q9H257 536 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 UCK1Q9HA47 277 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 OGFRQ9NZT2 677 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 KCND3Q9UK17 655 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 ICE1Q9Y2F5 2266 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 SPTBN1Q01082 2364 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CDC14CA4D256 554 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TOX3O15405 576 aaPredicted RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 GRID2O43424 1007 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 NUAK1O60285 661 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 VPS4BO75351 444 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 KATNA1O75449 491 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 KIAA0754O94854 1291 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 NDUFA10O95299 355 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 RARAP10276 462 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 GZMAP12544 262 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CA4P22748 312 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CES1P23141 567 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 CLCNKAP51800 687 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 SH3BP2P78314 561 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 MYL5Q02045 173 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 DSC2Q02487 901 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 IL11RAQ14626 422 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 RASGRP3Q8IV61 690 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TRIM11Q96F44 468 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TGM7Q96PF1 710 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PLEKHG4BQ96PX9 1271 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 LYSMD1Q96S90 227 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TWSG1Q9GZX9 223 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 ZNF768Q9H5H4 540 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 MRPL47Q9HD33 250 aaKnown RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 MYO1AQ9UBC5 1043 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PLEKHB1Q9UF11 243 aaPredicted RBP11.35□□□□□ -0.59
CSMD2-202ENST00000338325 TLK1Q9UKI8 766 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 VPS4AQ9UN37 437 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 PCDHGA6Q9Y5G7 932 aa11.35□□□□□ -0.59
CSMD2-202ENST00000338325 C1orf232A0A0U1RR37 186 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 GOLGA6L3A6NEY3 463 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 LRRC53A6NM62 1247 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 UBXN7O94888 489 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 AGFG2O95081 481 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 RECKO95980 971 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 PRLP01236 227 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 MYBL1P10243 752 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 TYRP1P17643 537 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 XRCC1P18887 633 aaPredicted RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 GARSP41250 739 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 SPINT3P49223 89 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 SEPHS1P49903 392 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 IHHQ14623 411 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 ASIC2Q16515 512 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 FHL5Q5TD97 284 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 HIST2H2BCQ6DN03 193 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 CAPRIN2Q6IMN6 1127 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 TMEM26Q6ZUK4 368 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 APTXQ7Z2E3 356 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 TMEM135Q86UB9 458 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 TRIM48Q8IWZ4 208 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 AOPEPQ8N6M6 819 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 LPCAT1Q8NF37 534 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 MAML1Q92585 1016 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 OSGEPL1Q9H4B0 414 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 FAM83DQ9H4H8 585 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 HAUS4Q9H6D7 363 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 PCDH9Q9HC56 1237 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 KLC4Q9NSK0 619 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 HAUS2Q9NVX0 235 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 LNPEPQ9UIQ6 1025 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
CSMD2-202ENST00000338325 TTLL3Q9Y4R7 772 aa11.34□□□□□ -0.59
CSMD2-202ENST00000338325 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 MFSD11O43934 449 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 CREG1O75629 220 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 RASSF9O75901 435 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 MTA2O94776 668 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 VIPP01282 170 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 MT-ND3P03897 115 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 PDGFAP04085 211 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 CCNYL3P0C7X3 344 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 FGF5P12034 268 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-202ENST00000338325 AMD1P17707 334 aa11.33□□□□□ -0.6
CSMD2-202ENST00000338325 GNLYP22749 145 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms