RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ATP6V1HQ9UI12 483 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CCDC162PA2VCL2 907 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 GSTM1P09488 218 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 AKAP5P24588 427 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TAF6P49848 677 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RFX4Q33E94 735 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ANKRD26P1Q6NSI1 321 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 BORAQ6PGQ7 559 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF517Q6ZMY9 492 aaPredicted RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PLEKHG7Q6ZR37 379 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TBC1D15Q8TC07 691 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TRPM4Q8TD43 1214 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ATL1Q8WXF7 558 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 DHRS1Q96LJ7 313 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PEBP4Q96S96 227 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 PRKACBP22694 351 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 NUDT6P53370 316 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 PON2Q15165 354 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 MZT2BQ6NZ67 158 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 PGM2L1Q6PCE3 622 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 STAG3L4Q8TBR4 150 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 ASIC4Q96FT7 647 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 CRISPLD1Q9H336 500 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 INTS10Q9NVR2 710 aaKnown RBP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 RNF11Q9Y3C5 154 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 PTPRJQ12913 1337 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 F8W810 466 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 ACKR2O00590 384 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 INMTO95050 263 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 FPGSQ05932 587 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 TSNQ15631 228 aaKnown RBP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF404Q494X3 552 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 MARC1Q5VT66 337 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 LRRC17Q8N6Y2 441 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 GPR63Q9BZJ6 419 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 C8orf4Q9NR00 106 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 C12orf71A8MTZ7 269 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 HNF4AP41235 474 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 ARSFP54793 590 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 SLC26A9Q7LBE3 791 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 CNIH3Q8TBE1 160 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 WNT8BQ93098 351 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF486Q96H40 463 aaPredicted RBP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
COL2A1-201ENST00000337299 VPS35Q96QK1 796 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 TWNKQ96RR1 684 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 CDT1Q9H211 546 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
COL2A1-201ENST00000337299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 UBXN8O00124 270 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 HAT1O14929 419 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 VPS4BO75351 444 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 BCAS1O75363 584 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 DIRAS1O95057 198 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 YES1P07947 543 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 COL6A1P12109 1028 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 HLCSP50747 726 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CLCN5P51795 746 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 TMEM132CQ8N3T6 1108 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 OR52J3Q8NH60 311 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 POF1BQ8WVV4 589 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 BHMTQ93088 406 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ZSCAN5AQ9BUG6 496 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 MRIQ9BWK5 157 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 ANKRD60Q9BZ19 345 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-201ENST00000337299 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
COL2A1-201ENST00000337299 AP2A1O95782 977 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms