RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GTPBP3Q969Y2 492 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CDADC1Q9BWV3 514 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ZDHHC6Q9H6R6 413 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 OR12D3Q9UGF7 316 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 GPN3Q9UHW5 284 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF639Q9UID6 485 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FBXO10Q9UK96 956 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 MFHAS1Q9Y4C4 1052 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 hCG_2039718K7EN88 272 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ERAL1O75616 437 aaKnown RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ASLP04424 464 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FSHRP23945 695 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CXCR2P25025 360 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 CCR10P46092 362 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 EPHB3P54753 998 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 PPP3CAQ08209 521 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SGCGQ13326 291 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 DNASE1L3Q13609 305 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SEC23AQ15436 765 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ACSBG2Q5FVE4 666 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 SLC30A10Q6XR72 485 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 USP45Q70EL2 814 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ANKRD23Q86SG2 305 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 TWIST2Q8WVJ9 160 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
COL4A6-201ENST00000334504 PXMP2Q9NR77 195 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
COL4A6-201ENST00000334504 FXYD6-FXYD2A0A087WZ82 144 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GTPBP1O00178 669 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 NOL4O94818 638 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 BTBD16Q32M84 506 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FAM76BQ5HYJ3 339 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 CPTPQ5TA50 214 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SNX33Q8WV41 574 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF570Q96NI8 536 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FXYD6Q9H0Q3 95 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TULP3O75386 442 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SLITRK3O94933 977 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 LHCGRP22888 699 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 DNASE1L1P49184 302 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ATP6V0D1P61421 351 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 MC1RQ01726 317 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ABRQ12979 859 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TIGD6Q17RP2 521 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 HAGHLQ6PII5 290 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FAM92BQ6ZTR7 304 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FBXO33Q7Z6M2 555 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GPALPP1Q8IXQ4 340 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF548Q8NEK5 533 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZBTB45Q96K62 511 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ULBP1Q9BZM6 244 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 KCNN2Q9H2S1 579 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 DHX33Q9H6R0 707 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF490Q9ULM2 529 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 C9JVG2 144 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 OR10H2O60403 315 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 YAP1P46937 504 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GDI2P50395 445 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZBED5Q49AG3 693 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ZNF280DQ6N043 979 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 INO80EQ8NBZ0 244 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SLC37A3Q8NCC5 494 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 BPIFB1Q8TDL5 484 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 SPG21Q9NZD8 308 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 MTRRQ9UBK8 725 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 POMPQ9Y244 141 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 PCDHB5Q9Y5E4 795 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TMEM150BA6NC51 233 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 A8MV72 311 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FGF10O15520 208 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 TRBC1P01850 177 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 COL6A1P12109 1028 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 POU2F1P14859 743 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FUT4P22083 530 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FMO1Q01740 532 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 UBR7Q8N806 425 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GLIS3Q8NEA6 775 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 FAM151AQ8WW52 585 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 WNT8BQ93098 351 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 QRICH2Q9H0J4 1663 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 OVOS2A0A0J9YW53 1432 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 OVOS2Q6IE36 1432 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GPR75-ASB3A0A0A6YYF3 556 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 CPSF4LA6NMK7 179 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 MANFP55145 182 aaKnown RBP9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ACTR3P61158 418 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 PFKPQ01813 784 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 RPA4Q13156 261 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 GCNT6Q5T4J0 391 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 PAOXQ6QHF9 649 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 ADAMTSL2Q86TH1 951 aa9.75□□□□□ -0.85
COL4A6-201ENST00000334504 PLCZ1Q86YW0 608 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms