RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CACNB2Q08289 660 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 GALNT2Q10471 571 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 KCTD2Q14681 263 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 PLEKHG6Q3KR16 790 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ZNF678Q5SXM1 525 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 HTRA1Q92743 480 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TMBIM1Q969X1 311 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ZUFSPQ96AP4 578 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SIAEQ9HAT2 523 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 GLOD4Q9HC38 313 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 GIN1Q9NXP7 522 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 MPP6Q9NZW5 540 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 MARCH4Q9P2E8 410 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 FBXW11Q9UKB1 542 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 PIN4Q9Y237 131 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 VWA7Q9Y334 891 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SUPT3HB4E1H0 165 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 BCAS1O75363 584 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 HLA-DQB2P05538 268 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 IMPDH1P20839 514 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 EDNRBP24530 442 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ELOAQ14241 798 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 DENND5AQ6IQ26 1287 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 C2CD4AQ8NCU7 369 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 PSD4Q8NDX1 1056 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 FIG4Q92562 907 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 KLHL5Q96PQ7 755 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ALPK1Q96QP1 1244 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CD320Q9NPF0 282 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CPA4Q9UI42 421 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 UBA6A0AVT1 1052 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 CLDN25C9JDP6 229 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SOCS7O14512 581 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 NCAM2O15394 837 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 MTSS1O43312 755 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 AQP9O43315 295 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CNTN5O94779 1100 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TAF6P49848 677 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 BNIP2Q12982 314 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 AAK1Q2M2I8 961 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 PAN2Q504Q3 1202 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 LCN8Q6JVE9 175 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SLC2A7Q6PXP3 512 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ARMCX2Q7L311 632 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SPRED1Q7Z699 444 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CRYBG2Q8N1P7 616 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CCDC126Q96EE4 140 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SNX27Q96L92 541 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 DOK1Q99704 481 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TOR3AQ9H497 397 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 RGS18Q9NS28 235 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TMEM30AQ9NV96 361 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 POLG2Q9UHN1 485 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 SNX5Q9Y5X3 404 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 SMIM28A0A1B0GU29 152 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TRIM64CA6NLI5 447 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 M0R3G1 203 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 MSI1O43347 362 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 XPNPEP2O43895 674 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 CLASP2O75122 1294 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 PRSS56P0CW18 603 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 LBPP18428 481 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 HTR1BP28222 390 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 PRDX3P30048 256 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 ACADVLP49748 655 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ARSDP51689 593 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 GLYATQ6IB77 296 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TFAP2DQ7Z6R9 452 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TERB1Q8NA31 727 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 ADAMTS16Q8TE57 1224 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TMEM125Q96AQ2 219 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 DUS3LQ96G46 650 aaKnown RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 SH3YL1Q96HL8 342 aaPredicted RBP7.84□□□□□ -1.15
VMA21-201ENST00000330374 NSMCE2Q96MF7 247 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 IL12RB2Q99665 862 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 BDH2Q9BUT1 245 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TUBB1Q9H4B7 451 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 TXNRD2Q9NNW7 524 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 NT5MQ9NPB1 228 aa7.84□□□□□ -1.15
VMA21-201ENST00000330374 MYBPHLA2RUH7 354 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 CCDC154A6NI56 674 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 TSPAN3O60637 253 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 ANXA9O76027 345 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 NADKO95544 446 aaPredicted RBP7.83□□□□□ -1.16
VMA21-201ENST00000330374 THRBP10828 461 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 CSRP3P50461 194 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 ARSFP54793 590 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 WNT3AP56704 352 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 CCNA1P78396 465 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 DMPKQ09013 629 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 MTA1Q13330 715 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 TTLL4Q14679 1199 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 INAQ16352 499 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 XAF1Q6GPH4 301 aa7.83□□□□□ -1.16
VMA21-201ENST00000330374 SPESP1Q6UW49 350 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms