RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NPNTQ6UXI9 565 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 MARK2Q7KZI7 788 aaKnown RBP13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 ZNF843Q8N446 348 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 TRAM1L1Q8N609 369 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 DTX3LQ8TDB6 740 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 USP7Q93009 1102 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 SH3KBP1Q96B97 665 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 CCDC74BQ96LY2 380 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 VAT1Q99536 393 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 STN1Q9H668 368 aaKnown RBP13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 GLOD4Q9HC38 313 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 TRIM39Q9HCM9 518 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 KCNK4Q9NYG8 393 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 ZNHIT2Q9UHR6 403 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 ZNF711Q9Y462 761 aa13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 PCYT1BQ9Y5K3 369 aaPredicted RBP13.44□□□□□ -0.26
GTF3C6-201ENST00000329970 PIEZO2Q9H5I5 2752 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 EFSO43281 561 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 GRID2O43424 1007 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 SPOPO43791 374 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 DUX1O43812 170 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 EPOP01588 193 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 F3P13726 295 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 PTPN3P26045 913 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 HHEXQ03014 270 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TFDP3Q5H9I0 405 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 WDR74Q6RFH5 385 aaPredicted RBP13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 SPOCD1Q6ZMY3 1216 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 USP53Q70EK8 1073 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 CHST15Q7LFX5 561 aaPredicted RBP13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 SLC9B2Q86UD5 537 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 CCDC170Q8IYT3 715 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 KATNAL2Q8IYT4 538 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TC2NQ8N9U0 490 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 AGBL5Q8NDL9 886 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 GPR26Q8NDV2 337 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 OR10G6Q8NH81 332 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TFB1MQ8WVM0 346 aaKnown RBP13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 CALR3Q96L12 384 aaKnown RBP13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 PLEKHG4BQ96PX9 1271 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 VPS35Q96QK1 796 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TAAR9Q96RI9 348 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 DDA1Q9BW61 102 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 SPATA16Q9BXB7 569 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TRABDQ9H4I3 376 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 UCK1Q9HA47 277 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 FOXJ2Q9P0K8 574 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 ATXN10Q9UBB4 475 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 TBC1D29Q9UFV1 150 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 ALG6Q9Y672 507 aa13.43□□□□□ -0.26
GTF3C6-201ENST00000329970 LOC285095A0A1B0GVY8 99 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 PRR19A6NJB7 356 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 B4E171 279 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 VEGFDO43915 354 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 CST8O60676 142 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 EML2O95834 649 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 MT-CYBP00156 380 aaPredicted RBP13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 ACP5P13686 325 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 HMGCLP35914 325 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 TSPAN7P41732 249 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 MAPK10P53779 464 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 RAB15P59190 212 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 ZDHHC20Q5W0Z9 365 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 CCDC70Q6NSX1 233 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 C11orf63Q6NUN7 778 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 ADGRG6Q86SQ4 1221 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 PHYKPLQ8IUZ5 450 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 RNF214Q8ND24 703 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 GLYATL1Q969I3 302 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 SGF29Q96ES7 293 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 SLC38A3Q99624 504 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 TIMM29Q9BSF4 260 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 CEP41Q9BYV8 373 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 FAM153AQ9UHL3 310 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 PCDHB11Q9Y5F2 797 aa13.42□□□□□ -0.26
GTF3C6-201ENST00000329970 hCG_1818297A0A087WSY0 165 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 LILRA5A6NI73 299 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 HACD1B0YJ81 288 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 STMND1H3BQB6 276 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ZRANB2O95218 330 aaKnown RBP eCLIP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 SLC25A14O95258 325 aaPredicted RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ITGB2P05107 769 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 CCL4P13236 92 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ZNF8P17098 575 aaPredicted RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 XRCC1P18887 633 aaPredicted RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 CSTF2P33240 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 CD68P34810 354 aaPredicted RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 MAGEA1P43355 309 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 NOP2P46087 812 aaKnown RBP13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 ARSDP51689 593 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 DYNLT1P63172 113 aa13.41□□□□□ -0.26
GTF3C6-201ENST00000329970 WASHC5Q12768 1159 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms