RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TGM1P22735 817 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 IGFBP6P24592 240 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GSTM2P28161 218 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SERPINB1P30740 379 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 MAP2K4P45985 399 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 LEPRP48357 1165 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GP2P55259 537 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 NCS1P62166 190 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 FKBP1BP68106 108 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CD47Q08722 323 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CTF1Q16619 201 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CATSPEREQ5SY80 951 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 DENND5AQ6IQ26 1287 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SPESP1Q6UW49 350 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 DNAJC14Q6Y2X3 702 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SCML4Q8N228 414 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CNIH3Q8TBE1 160 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CFHR5Q9BXR6 569 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 NXF3Q9H4D5 531 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AS3MTQ9HBK9 375 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AKIP1Q9NQ31 210 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 MRGBPQ9NV56 204 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 HOXC10Q9NYD6 342 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ABT1Q9ULW3 272 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ADAMTS5Q9UNA0 930 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 HBP1O60381 514 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 DLGAP3O95886 979 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ALPLP05186 524 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 FYNP06241 537 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 LBPP18428 481 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PAMP19021 973 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 S100A1P23297 94 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ALDH3A2P51648 485 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 TNFAIP1Q13829 316 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ADPRMQ3LIE5 342 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 FBXO47Q5MNV8 452 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 C6orf141Q5SZD1 244 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CELF3Q5SZQ8 465 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PLEKHG7Q6ZR37 379 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ISCA2Q86U28 154 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CHDHQ8NE62 594 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 OR10Q1Q8NGQ4 319 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 STON2Q8WXE9 905 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ELMO1Q92556 727 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 FIG4Q92562 907 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ACOX2Q99424 681 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 FAM49AQ9H0Q0 323 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 VTA1Q9NP79 307 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PAK1IP1Q9NWT1 392 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ENPP5Q9UJA9 477 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 NUDT5Q9UKK9 219 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ERVK-11Q9UQG0 969 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 COL4A5P29400 1685 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CCDC154A6NI56 674 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 C16orf96A6NNT2 1141 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 HS6ST1O60243 411 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 NDUFS2O75306 463 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PSMB9P28065 219 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 MAXP61244 160 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 YWHAHQ04917 246 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ITKQ08881 620 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 KCNAB2Q13303 367 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SELPLGQ14242 412 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 LAPTM4AQ15012 233 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AAK1Q2M2I8 961 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AGAP7PQ5VUJ5 663 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 C9orf57Q5W0N0 161 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 BLOC1S3Q6QNY0 202 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 PAGE2Q7Z2X7 111 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SLC22A9Q8IVM8 553 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CNTN4Q8IWV2 1026 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 APPL2Q8NEU8 664 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ITFG1Q8TB96 612 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 RPL3LQ92901 407 aaKnown RBP9.6□□□□□ -0.87
PTPRA-202ENST00000318266 MAGED4Q96JG8 741 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 NODALQ96S42 347 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AMBRA1Q9C0C7 1298 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 WDCPQ9H6R7 721 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GMIPQ9P107 970 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 SLCO3A1Q9UIG8 710 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 CCDC85CA6NKD9 419 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 FAM47E-STBD1D6RA91 191 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 G3V2T6 193 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 H0YAE9 185 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 NCAM2O15394 837 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 MTSS1O43312 755 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 TBC1D4O60343 1298 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 UGT2B11O75310 529 aa9.59□□□□□ -0.87
PTPRA-202ENST00000318266 DEAF1O75398 565 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms