RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SCNN1GP51170 649 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 EMX2Q04743 252 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 NEDD8Q15843 81 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 CRY1Q16526 586 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 XKR5Q6UX68 686 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 PGBD5Q8N414 524 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 STAG3L4Q8TBR4 150 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 RSPH1Q8WYR4 309 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 LPPQ93052 612 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 ISG20Q96AZ6 181 aaKnown RBP18.98■□□□□ 0.63
RTN4-201ENST00000317610 RPL10LQ96L21 214 aaKnown RBP18.98■□□□□ 0.63
RTN4-201ENST00000317610 SERPINB11Q96P15 392 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 TMEM209Q96SK2 561 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 C1QTNF3Q9BXJ4 246 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 TMEM248Q9NWD8 314 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 MYO16Q9Y6X6 1858 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 CCDC162PA2VCL2 907 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 CCDC154A6NI56 674 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 PRSS23O95084 383 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 C1RP00736 705 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NPPAP01160 153 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 ENO2P09104 434 aaPredicted RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 MBL2P11226 248 aaPredicted RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 PORP16435 677 aaPredicted RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 BNIP3Q12983 259 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 TGFBIQ15582 683 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 TYSND1Q2T9J0 566 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 PYCR3Q53H96 274 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 ANKS6Q68DC2 871 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 IL31Q6EBC2 164 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NANOGP8Q6NSW7 305 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 MSANTD2Q6P1R3 559 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 DCDC5Q6ZRR9 648 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 EFL1Q7Z2Z2 1120 aaKnown RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 TLK2Q86UE8 772 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 FBXO39Q8N4B4 442 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 DDHD1Q8NEL9 900 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 CHID1Q9BWS9 393 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 DERL2Q9GZP9 239 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NANOGQ9H9S0 305 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 SP110Q9HB58 689 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NMUR1Q9HB89 426 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 GIT1Q9Y2X7 761 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 SLC30A1Q9Y6M5 507 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 GRXCR2A6NFK2 248 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NOL3O60936 208 aaKnown RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 ATP6V1G1O75348 118 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 SLC22A3O75751 556 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 RPP40O75818 363 aaKnown RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 BAIAP3O94812 1187 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 CCNA2P20248 432 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 MATN1P21941 496 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 YAP1P46937 504 aaKnown RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 PHEXP78562 749 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 TUBA3CQ13748 450 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 PLCL1Q15111 1095 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 MAPRE1Q15691 268 aaKnown RBP18.97■□□□□ 0.63
RTN4-201ENST00000317610 LDLRAD1Q5T700 205 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 SLC39A13Q96H72 371 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 NTN4Q9HB63 628 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.97■□□□□ 0.639e-9■■■■■ 42.6
RTN4-201ENST00000317610 ZIM2Q9NZV7 527 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 GNPTGQ9UJJ9 305 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 RIMKLBQ9ULI2 386 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 PCDHGA11Q9Y5H2 935 aa18.97■□□□□ 0.63
RTN4-201ENST00000317610 SOBPA7XYQ1 873 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 BOLA2-SMG1P6H3BVE0 249 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 ZBTB11O95625 1053 aaPredicted RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 ALBP02768 609 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CDH1P12830 882 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 POLR2JP52435 117 aaKnown RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 STC1P52823 247 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 UFM1P61960 85 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 ECT2LQ008S8 904 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CBX3Q13185 183 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 SLC44A4Q53GD3 710 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CD300LGQ6UXG3 332 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 AGMOQ6ZNB7 445 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CHST15Q7LFX5 561 aaPredicted RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 SFRP1Q8N474 314 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 PSMG2Q969U7 264 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 TMEM74Q96NL1 305 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 TDRD1Q9BXT4 1180 aaKnown RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 SYTL2Q9HCH5 934 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 SEMA4BQ9NPR2 832 aaPredicted RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 NUDT5Q9UKK9 219 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 SUPT3HB4E1H0 165 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 UPK1AO00322 258 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 KLK8O60259 260 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 SUPT3HO75486 399 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 BMXP51813 675 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 FUT11Q495W5 492 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 SETMARQ53H47 684 aaPredicted RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 TFAP2DQ7Z6R9 452 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CHPT1Q8WUD6 406 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 LRRC3Q9BY71 257 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 ZYG11BQ9C0D3 744 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 CATSPERZQ9NTU4 200 aa18.96■□□□□ 0.63
RTN4-201ENST00000317610 INTS7Q9NVH2 962 aaKnown RBP18.96■□□□□ 0.63
RTN4-201ENST00000317610 SLAMF8Q9P0V8 285 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms