RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TAAR9Q96RI9 348 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 SPRY4Q9C004 299 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 SEMA4CQ9C0C4 833 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 GLOD4Q9HC38 313 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 TRIM39Q9HCM9 518 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
FOXR1-201ENST00000317011 ATXN10Q9UBB4 475 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 TBC1D29Q9UFV1 150 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 COL6A6A6NMZ7 2263 aa15.4■□□□□ 0.06
FOXR1-201ENST00000317011 LOC285095A0A1B0GVY8 99 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 GPR89AB7ZAQ6 455 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 PPP1R12AO14974 1030 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 ASMTLO95671 621 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 EPOP01588 193 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 GPR89BP0CG08 455 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 PTPN3P26045 913 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CSF2RBP32927 897 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CD68P34810 354 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CCZ1BP86790 482 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 ADCY2Q08462 1091 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 WASHC5Q12768 1159 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 GALNT3Q14435 633 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 PRKD1Q15139 912 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 MAP9Q49MG5 647 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 TAF1BQ53T94 588 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 PDPK2PQ6A1A2 396 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 WDR74Q6RFH5 385 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 XKR5Q6UX68 686 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 RAD9BQ6WBX8 426 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CHST15Q7LFX5 561 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 ARHGAP22Q7Z5H3 698 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 ZFAND4Q86XD8 727 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 TRAM1L1Q8N609 369 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 SPATA22Q8NHS9 363 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 DTX3LQ8TDB6 740 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 CCDC74BQ96LY2 380 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 SRPK1Q96SB4 655 aaKnown RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 RAD18Q9NS91 495 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 KCNK4Q9NYG8 393 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 AKAP7Q9P0M2 348 aaPredicted RBP15.39■□□□□ 0.05
FOXR1-201ENST00000317011 PRKAB1Q9Y478 270 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 HYOU1Q9Y4L1 999 aa15.39■□□□□ 0.05
FOXR1-201ENST00000317011 ZNF462Q96JM2 2506 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 TRBV23OR9-2A0A075B6M9 112 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 OR5K4A6NMS3 321 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 B4E171 279 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 GRID2O43424 1007 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 NRDCO43847 1150 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 NDST3O95803 873 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 MT-CYBP00156 380 aaPredicted RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 KRT1P04264 644 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 ZNF8P17098 575 aaPredicted RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 TSPAN7P41732 249 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 SRSF6Q13247 344 aaKnown RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 TFDP2Q14188 446 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 LINC00303Q3SY05 128 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 KIAA1614Q5VZ46 1190 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 B4GALNT4Q76KP1 1039 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 ADGRG6Q86SQ4 1221 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 RFX6Q8HWS3 928 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 BMPERQ8N8U9 685 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 AGBL5Q8NDL9 886 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 RCBTB1Q8NDN9 531 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 HERPUD2Q9BSE4 406 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 ZSCAN5AQ9BUG6 496 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 CEP41Q9BYV8 373 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 TMEM9Q9P0T7 183 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 SEPT10Q9P0V9 454 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 SAE1Q9UBE0 346 aaPredicted RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
FOXR1-201ENST00000317011 GCN1Q92616 2671 aaKnown RBP15.38■□□□□ 0.05
FOXR1-201ENST00000317011 KIR2DS5A0A0G2JLQ3 304 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 A0A0G2JNG1 304 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 KIR2DS3K7RE56 304 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 PSTPIP1O43586 416 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 CST8O60676 142 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 F3P13726 295 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 BPIP17213 487 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 XRCC1P18887 633 aaPredicted RBP15.37■□□□□ 0.05
FOXR1-201ENST00000317011 MAGEA1P43355 309 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 NOP2P46087 812 aaKnown RBP15.37■□□□□ 0.05
FOXR1-201ENST00000317011 MAPK10P53779 464 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 HHEXQ03014 270 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 KIR2DS5Q14953 304 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 TMEM164Q5U3C3 297 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 KDELC1Q6UW63 502 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 KDELC2Q7Z4H8 507 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 CCDC170Q8IYT3 715 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 GLYATL1Q969I3 302 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 SH3KBP1Q96B97 665 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 SGF29Q96ES7 293 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 MED8Q96G25 268 aa15.37■□□□□ 0.05
FOXR1-201ENST00000317011 SLC38A3Q99624 504 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms